Lactuca sativa (garden lettuce): 111896094
Help
Entry
111896094 CDS
T05352
Symbol
SR34
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111896094 (SR34)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111896094 (SR34)
Spliceosome [BR:
lsv03041
]
Common components
Common spliceosomal components
SR proteins
111896094 (SR34)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
111896094
NCBI-ProteinID:
XP_023747882
LinkDB
All DBs
Position
8:81957110..81960685
Genome browser
AA seq
286 aa
AA seq
DB search
MNMSRSSRTIYVGNLPGDIREREVEDLFYKYGQIAHIDLKIPPRPPGYAFVEFEEARDAE
DAIRGRDGYDFDGHRLRVELAHGGRGNSSSTDRHGGYGSGRGGGGGGGGRSGGVSRRSDY
RVMVTGLPSSASWQDLKDHMRRAGDVCFSQVFREGGGTTGIVDYTNYDDMKYAIRKLDDS
EFRNAFSRGYIRVKEYDSSHSRSRSRSRSKSRSYSRSRSRSISKSPKAKAKASRSASPRS
GSKSRSPSRSRSPLPSRPKRVSKSPKRRSPSKSPSRSRSRSKSLSR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgagtcgctctagcagaactatatatgttggcaatcttcctggggatattcgc
gagcgagaagtggaagatttgttttacaagtatggtcaaatagcccatattgatttgaaa
attccaccaaggcctccaggttatgcttttgtagagtttgaagaggctcgtgatgctgaa
gatgctattcgtggtcgcgatggctatgattttgatgggcacagattaagggtggaactc
gcccatggtggtcgtggcaactcatcttctacagaccgtcatggcggttatggcagtggt
cgcggtggtggtggtggtggtggtggtcgcagtggtggagtttctagacgctctgattac
agagttatggtgactggcttaccctcttctgcatcatggcaagacctaaaggatcacatg
cgcagagctggagatgtttgtttctcccaagtttttagggagggtgggggtactacaggg
attgtggactacacaaactatgatgacatgaaatatgctatacggaaattggatgactct
gagtttcgaaacgccttctctcgtggatacatacgagtgaaggaatatgattcgagccat
tctaggagccggagtcgcagtagaagcaaaagcaggagctacagcaggagtcgcagcagg
agcataagcaagtccccgaaagcaaaagcaaaagcttcaagatctgcttcacctcgttct
ggatctaaatcaagatctccttcaagatccagatctcccctaccttctcgccctaagcgg
gtaagtaaaagcccaaaaagacgcagtcctagcaagagccccagcagaagcagaagcagg
agcaagagtttatctcggtaa
DBGET
integrated database retrieval system
