Lactuca sativa (garden lettuce): 111896108
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Entry
111896108 CDS
T05352
Name
(RefSeq) WD repeat-containing protein GTS1
KO
K24758
WD repeat-containing protein 89
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsv04990
]
111896108
Domain-containing proteins not elsewhere classified [BR:
lsv04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
111896108
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_like
BAAT_C
Motif
Other DBs
NCBI-GeneID:
111896108
NCBI-ProteinID:
XP_023747899
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Position
8:81712645..81715142
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AA seq
396 aa
AA seq
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MDATDMDVEVNEQHNRIIPDSSSSSKRFALKNSIQTNFGDDYVFQIVPKEDWTTMAVSLS
SNTVKLYSPVTGQFVGECCRGQHSDSINHILFSGNILHSCSSDGTLRAWDTRSYQQVSCL
NAGPSQEIFSFSFGGSGDHLLAAGCKSQILFWDWRNKKQVACLEESHMDDVTQVHFVPNE
KNKLISASIDGLICTYDTSGEINDDDHLQSVINVGTSIGKVGLFGGTYEKLWCLTHIETL
SIWDLKESRVEANFEDARTLASNSWSQEHVDYFVDCHYSAVDERLWVIGGTNGGSLGYFP
VGYAEGMRSILSPEAVLHGGHGGVVRSVLPSPTMRSVMNNENQNQTHGIFGWTGGEDGRL
CCWLSDNSSDINQSWISTSLVEKHPKNRKKKRHQPY
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgacagatatggacgtagaagtaaatgaacaacataaccgcatcattcccgat
tccagcagctcatcgaagcgatttgcattaaaaaactccattcaaaccaacttcggtgat
gattacgttttccaaatcgtcccaaaggaagactggacaacgatggccgtgtctctgtcg
tcaaataccgtgaagctgtattcaccggttaccggtcagttcgtcggagaatgctgcaga
ggacagcattctgatagtattaaccacatcttattttcgggtaatatattgcactcttgc
tcgtccgatggcactctcagggcttgggatactcgctcttatcaacaggtgtcgtgtcta
aatgctggtccttctcaagaaatatttagtttttcatttggcggatcaggtgatcatctt
cttgctgcaggttgtaaatctcagatacttttctgggattggagaaacaagaagcaggtt
gcctgcttggaggagtctcatatggatgatgtgacacaggttcattttgtaccgaatgag
aaaaataagcttatatctgcctctattgatggactaatttgtacctatgacaccagtgga
gaaatcaatgatgatgatcatctgcaatcagtgattaatgtggggacatctatcggaaaa
gtggggctttttggagggacatatgagaagctatggtgtttgactcatattgaaacttta
agtatttgggatttgaaagagtctagagttgaagccaactttgaggatgctcgtaccttg
gcctctaatagctggtctcaagaacatgttgactattttgttgactgtcactactcggcg
gtggatgagcggttatgggttataggcggcactaatggcggcagtttgggatacttccct
gtagggtatgcagaaggtatgagatcaattttgtcaccagaagcggttctccatggtggc
catggtggtgttgttaggagtgtgctgccttcacccaccatgagaagtgtgatgaacaat
gaaaaccagaaccaaacacacgggatatttgggtggacaggtggcgaagacggacgattg
tgttgctggttgtctgacaattcgtctgacataaatcaatcatggatatcgacttctttg
gttgaaaaacaccccaaaaatcgcaagaaaaagaggcatcaaccttattag
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