Lactuca sativa (garden lettuce): 111896118
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Entry
111896118 CDS
T05352
Symbol
LOC111896118
Name
(RefSeq) transcription factor PRE6
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111896118 (LOC111896118)
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111896118 (LOC111896118)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
F36G3_coil
Ran-binding
DMPK_coil
CENP-F_leu_zip
DUF948
RIX1
SBP_bac_4HB
Motif
Other DBs
NCBI-GeneID:
111896118
NCBI-ProteinID:
XP_023747905
LinkDB
All DBs
Position
8:80793660..80795348
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AA seq
93 aa
AA seq
DB search
MSGRRSRSRQTGVSRISDDQIADLVSKLQQIIPHNIHATRSDKVSASRVLQETCNYIRSL
HREVDDLSERLSELLQSTDANSAEAAIIRSLFM
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagaagatctcgatcacggcaaactggagtttccaggatcagcgacgatcag
attgccgacctcgtctccaagttacaacaaattatacctcataatatccacgcaacccgt
tctgacaaggtttcagcttcaagagtgttgcaggagacatgcaattatatcagaagctta
cacagagaagtggatgatttaagcgaaagactttcagagcttttgcaatctacggacgcc
aacagtgctgaagcagccattattaggagcttatttatgtaa
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