Lactuca sativa (garden lettuce): 111896119
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Entry
111896119 CDS
T05352
Name
(RefSeq) alpha-amylase 3, chloroplastic
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00500
Starch and sucrose metabolism
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
111896119
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
111896119
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Gene cluster
GFIT
Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
Rhodopsin_N
DosC_2nd
RRM_5
Motif
Other DBs
NCBI-GeneID:
111896119
NCBI-ProteinID:
XP_052623018
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All DBs
Position
8:81263665..81268031
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AA seq
899 aa
AA seq
DB search
MATVPLEPILHHHHWQETSKSPMESEKHKQSSLNYTWKTRNCLIGNGAKRCNFRPASSRV
MKTTVRASSNSSAAELSLSNTSESDNVIFHKTFPLQCIEKVEGKILVRLDCGKDEENLQL
VVGCNLPGKWILHWGINYANDIGSDWDQPPVEMRPLGSIPIKEYAIETPLEKSVEKEAGF
IYEVKIDFNTRSSISAINFVLRDEETGSWYQHKGTDFKVPLTNISNDDGNTVETKQDFAI
WPGTLGHLSNMLQKSDGGNSKESTQKRNLSYEEYDIVKQSLVDNSMSVCIKRCPEFVNNL
LHIETDIPGDVVVHWGVCKDESKKWEIPTGPYPDKTSIFKNKALQTHLQKKEGGCGCSGL
FPLDAGIEGFLFVLKVNNNTWVNCMGDDFYIPMSNERNFKKPEHIGEENVSTSMKLDSSQ
DVSTNTDELINEIRHLVIGISSEKKRKTKSKETQENILREIEKLAAEAYSIFRSSIPSFK
KKPESESESKEAEPDLKISSGTGSGFEILCQGFNWESHKSTSWYSELQDKAAELSSLGFT
IVWLPPPTESISPQGYMPKDLYNLNSRYGNIEELKSLVNKFHEVGIRALGDAVINHRCAH
SQNQNGVWNIFGGRLDWDDSAVVGDDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDLKE
WLCWLRKEIGYDGWRLDFVRGFWGGYVKDYMDASEPYFAVGEYWDSLNYTYGEMDYNQDS
HRQRIVDWINATNGTAGAFDVTTKGILHSALEKHEYWRLSDSKGKPPGVVGWWPSRAVTF
IENHDTGSTQGHWRFPGGKEMQGYAYILTHPGTPSVFYDHIFSHYNSQISTLISIRNRNK
IHCRSMVEISKAEGDVYAAIIDEKIAMKIGPGHFEPPQSGPHQWCLAAEGNDYKVWEAL
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggttcctctcgagcctatcctccatcatcatcactggcaggaaacctcaaag
tctccaatggaatctgaaaagcataagcaatcttccctgaattacacttggaagacaagg
aattgtttgatcggaaatggcgccaaacgctgcaacttcaggcctgctagttctagggtt
atgaaaaccaccgttagagcttcttctaatagctcagctgctgagttatctctttccaat
acatccgagtccgataatgtcatcttccacaaaacatttccattgcaatgtatcgaaaag
gtcgaaggaaagatattagtcagattagattgtggaaaagatgaagagaatttgcagctt
gttgttggatgcaatcttccagggaaatggattcttcattggggaattaattatgctaac
gacattggcagtgattgggatcagcctcctgttgagatgagacctctaggctctattccc
attaaggaatatgcaattgagacccctttagaaaaatcagtggagaaggaagcagggttc
atatatgaagtgaagatcgatttcaacaccagaagttcaatttcagcaataaattttgta
ttaagggatgaagaaactggatcttggtatcaacacaaagggacagattttaaggtgcct
cttacaaatatatctaatgatgatggcaatactgtagaaactaaacaagattttgccata
tggccagggactctgggacacttatctaacatgttgcagaaatctgatggtggcaattca
aaagaatctacacagaagaggaacctttcttatgaggaatatgacattgtaaaacaatca
ttggttgataactccatgagtgtttgcataaagagatgtcccgaatttgttaataatctt
ctgcatatagaaactgatattcctggtgatgttgttgttcattggggtgtatgcaaagat
gagagtaaaaaatgggaaattccaactggaccatatccagataaaacatcaatatttaag
aacaaggctttgcagactcatttacagaaaaaagaaggtggatgtgggtgttctggatta
tttccactagatgcaggaattgaaggatttctttttgtgttaaaagtgaacaataacaca
tgggtaaactgtatgggagatgatttttacatacccatgtcaaatgaaagaaactttaag
aaaccagaacacataggagaagagaatgtgtccacgagtatgaaattagattcttcacaa
gatgtttccacaaatacagacgaattaatcaatgaaataagacacctggtgattggcatt
tcctctgaaaagaaacgaaaaacaaaaagcaaagaaacacaagaaaacattcttcgtgag
attgaaaagttagctgcagaagcctacagcattttcagaagttccattccatctttcaaa
aagaaaccggaatcggaatcggaatccaaagaagcagaacccgatttgaaaataagttca
ggaacaggttcaggttttgaaattttatgccagggattcaattgggaatcccacaaatct
acaagttggtattcagagctacaagataaagctgctgagctgtcatcactagggtttacc
attgtttggctacctccacctacagaatctatctcccctcaaggctacatgcccaaggat
ctttataatttgaactccaggtatggaaacattgaggaattaaagtctcttgtgaataaa
ttccatgaagttggtatcagagctttaggtgatgctgttataaatcatcgttgtgcacat
tcccagaatcaaaatggtgtttggaatatttttggtgggcgtttggattgggatgatagt
gcagttgttggtgatgatcctcatttccagggtcgaggaaacaagagtagtggagataat
ttccatgctgctccaaacattgatcattcacaagagtttgtaaggaaagatcttaaagaa
tggttatgttggctgaggaaggaaatagggtatgatggatggaggcttgattttgtgagg
ggattttggggaggttatgtaaaagattacatggatgcaagtgaaccttattttgcagtt
ggagaatattgggattctttaaattatacatatggtgaaatggattataatcaagatagc
catagacaaaggattgttgactggattaatgccactaatggaactgctggagcctttgat
gtcactacaaaaggaattctccattccgcacttgaaaaacatgaatattggagattatcc
gattccaaaggaaaaccgccaggtgtcgttgggtggtggccttctcgtgctgttaccttc
atagaaaatcatgacaccggttctacacagggtcattggagatttcctggtggaaaggag
atgcaagggtatgcatacatcttgactcatcctggaacaccatcggttttctatgatcat
attttctctcactacaactcccaaatatctacactcatttctatcaggaatcgcaacaaa
attcattgtcgtagcatggttgaaattagcaaggcagaaggagatgtttatgcagcaatt
attgatgaaaaaatagcaatgaagattggaccaggccactttgaaccacctcaatctggg
ccccaccaatggtgtttggctgctgagggtaatgattacaaggtctgggaagctttataa
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