KEGG   Lactuca sativa (garden lettuce): 111896438
Entry
111896438         CDS       T05352                                 
Name
(RefSeq) protein decapping 5 isoform X1
  KO
K18749  protein LSM14
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111896438
Messenger RNA biogenesis [BR:lsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111896438
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 111896438
NCBI-ProteinID: XP_023748194
LinkDB
Position
4:complement(31591423..31595215)
AA seq 520 aa
MAADSSRSSTSSADTYIGSLISLTSKSEIRYEGILYNINTEESSIGLRNVRSFGSEGRKK
DGPQIMPSEKVYEYILFRGSDIKDLQVKTSPPVQQPTQPINSDPAIIQSHYPRPTLTPST
LPPTANTNSFLDQTTPNQQLGHSGMPLYQPDGNMASWGPSPPPPNSNSLQMPMYWPGFYP
QSMYRPMQYPNFNSPLPGGLPNLPEYSSSLLPTSASSASTLLGSTLPSSLPPVPPLVLTT
EPLPNFLQTNVPNTNPVVSTTTITNSNSTPDVNVSIAPVSNNSIESLTPSLVTHGQLLQP
GKDTGVSFSSSQSSQAVIHKDVDPTPLSETPVEAQPPILPLPNQPRNAPKANGATYHNHH
NYRGRERGRGSGVNGSRPVMKFTEEFDFTAMNEKFNKDEVWGTLGKTSSKDSDEDELQDE
NYNAALPKLDVKPVYSKDDFFDTLSSNSSDHQLNNGRTRFSEQMKLDTETFGEFSRYRGG
RGGRGPYRGGRSRGGGGYYHGRGYNYVNRGRGGRILSRDY
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggcggccgatagttctagatcttcaacatcatcggccgatacgtacattggaagcttg
attagtttgacgtccaagagcgagatccgatatgagggaattttatacaacatcaacacc
gaagaatcctcaatcggattgcggaacgtaagatcatttggaagtgaaggccgaaagaaa
gatggaccacaaatcatgcccagtgagaaagtttatgaatacatcttatttcgtggaagt
gacatcaaggatcttcaggtgaaaacatcaccacctgttcaacaaccaacacaacccata
aacagtgatcctgccattatacaatctcactaccctcggccaactttaacaccttcaacc
ctccccccaactgctaacaccaactcttttcttgaccaaactacccctaaccaacaacta
ggacactctggcatgccattataccaaccagatggaaatatggcttcgtggggcccatcg
ccacctcctccaaattccaattctcttcaaatgccaatgtattggccaggattctatcca
cagtcaatgtatcgaccaatgcagtatcctaatttcaactctcccttgcccggtgggctg
cccaacctgcccgaatattcatcttcattattaccaacatccgccagctcagcttctact
ttactggggtccaccttgccttccagtcttcctcctgttccacctttggtattaaccact
gaacccttaccaaactttttacaaactaatgtccccaacactaaccctgtggtttctact
actactattaccaattccaattctacccctgatgtaaatgtcagcatagctccagtttct
aacaactccattgagtcactgacaccatcactagtgacacatggacagttgttgcagcct
gggaaagatacgggtgtttcattttcatcatctcagtcttctcaagctgttattcataag
gatgtggaccccacaccattgtcagaaacacctgttgaagctcagcctccaatattgcca
ttaccaaatcaaccacgtaatgctccaaaggcaaatggagctacttaccataatcaccat
aattacagagggcgtgaaagaggcagaggatcaggggtaaatggctcaagaccagtgatg
aaatttactgaagagtttgactttactgcaatgaatgaaaagttcaacaaggatgaagtc
tggggtactttgggaaaaaccagttcaaaagatagtgatgaggatgaattacaagatgaa
aattataatgctgctctaccaaaattggacgtcaagcctgtttatagtaaggatgatttt
tttgatacattatcgagcaactccagtgatcatcaattaaataatggaaggacaagattc
tctgagcagatgaaactagatacagagacgtttggagaattctcaagataccgagggggg
aggggcggccgtgggccctaccgtggtggtcgttcacgaggtggtggcggctattatcat
ggaaggggatacaattatgtcaataggggtcgtggtgggagaattctttcccgtgattat
taa

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