Lactuca sativa (garden lettuce): 111896455
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Entry
111896455 CDS
T05352
Name
(RefSeq) RING-H2 finger protein ATL18
KO
K16282
E3 ubiquitin-protein ligase RHA2 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111896455
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111896455
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111896455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-ANAPC11
zf-RING_4
RINGv
Prok-RING_1
zf_RING_Vps8
FANCL_C
Prok-RING_4
zf-Nse
PHD
zf-C3H2C3
zf-C3HC4_4
Baculo_RING
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
111896455
NCBI-ProteinID:
XP_023748213
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Position
4:complement(32879886..32880293)
Genome browser
AA seq
135 aa
AA seq
DB search
MSVYILSYVNHLIRAIDFLINHVLFHHRMFHLPEKFDWISYSGGALLNEEVECAICLSKI
EDDDEIRELRCDHLFHRNCLDTWLSYGHTTCPLCRHNLLVPPKIEEACEIGSQEALFLDL
CETAPSNDESRWWLR
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtttacattctatcgtatgttaaccatttgatacgggctattgatttcttgatc
aaccatgtcttattccaccaccgtatgttccacctgccggaaaaatttgattggatatca
tatagtggtggagcactgctgaacgaagaggtagaatgtgccatttgcttgagcaaaatt
gaggatgacgatgagattagagaattaaggtgtgatcatctctttcacagaaactgctta
gatacgtggctctcatatggacatacaacctgccccttatgccgccataatctactagtg
ccacccaagattgaagaggcttgtgaaatcggcagccaggaagcgttgtttttggatctt
tgtgaaactgctccaagtaatgatgagagtagatggtggctgagataa
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