KEGG   Lactuca sativa (garden lettuce): 111896650
Entry
111896650         CDS       T05352                                 
Name
(RefSeq) splicing factor U2af small subunit B isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111896650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsv03041]
    111896650
Spliceosome [BR:lsv03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111896650
 Complex B
    111896650
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 111896650
NCBI-ProteinID: XP_023748389
LinkDB
Position
6:complement(59403711..59405723)
AA seq 286 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
GVDAQGNPIDPRKIQDHFEDFYEDLFEELNKYGEIESLNVCDNLADHMVGNVYVQFREEE
YAAKALKNLTGRYYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIGREL
RRELFGRYRRRHSRSRSRSRSPYRHRSYEERGHSGHSHSRRYDDRDRDRDYYHERGSRRH
RSTSPLHRRQLSPVREGSEERRAKIEEWNRKREEAAKVNMVNDYEH
NT seq 861 nt   +upstreamnt  +downstreamnt
atggcggagcatttagcgtcgatcttcgggacggagaaggacagagtcaattgtccattt
tacttcaagattggagcctgtaggcatggcgatcgatgttccaggctccacacaaaacct
agcattagtcctacattgttactgtctaacatgtaccagcgccctgatatgatcactcct
ggcgtcgatgctcaaggaaatccaatcgatcctcgaaaaatccaagatcacttcgaggat
ttctatgaagatctcttcgaggagctgaacaagtatggggaaatcgaaagcttgaatgtt
tgtgacaaccttgctgaccacatggtgggaaatgtatatgttcagtttagggaagaagaa
tacgctgcaaaagcactcaagaatctcactggaagatactacgcaggtcgaccaatcatt
gttgacttctcacctgtgactgatttccgggaagcaacttgcagacaatatgaagaaaac
acctgcaatcgtggtggatactgcaacttcatgcatctaaaaagaattggcagggaattg
aggagagagctgtttggtaggtatagaagaaggcatagtcgtagcagaagtaggagtaga
agtccatacagacatcgaagctatgaagagcgagggcattctggtcattctcatagcaga
agatatgatgacagggatagagacagggattactaccatgagagagggtcaagaaggcat
agaagcacaagccctcttcataggagacagcttagtcctgttagggaaggtagtgaagaa
aggcgtgcaaaaattgaggaatggaataggaaaagggaagaagcagcaaaagtcaacatg
gtcaatgattatgagcattga

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