Lactuca sativa (garden lettuce): 111896682
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Entry
111896682 CDS
T05352
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111896682
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111896682
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111896682
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111896682
Membrane trafficking [BR:
lsv04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
111896682
Ion channels [BR:
lsv04040
]
Chloride channels
Chloride channel (CLC)
111896682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Orthopox_F6
Motif
Other DBs
NCBI-GeneID:
111896682
NCBI-ProteinID:
XP_023748416
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All DBs
Position
7:104973527..104982650
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AA seq
796 aa
AA seq
DB search
MLANHLQNGVETAKLIWSRLPNAEDASDAELDEDGVLRNDGFDGVESLDYEVIENYAYRQ
EQARRGKLYVWYYVGVKWFFALLIGIGTGFAAVLINISVENFAGWKYSWTFTIIQRSYVA
GFIVYTSINLALVFSSVYIITQFAPAAAGSGIPEIKGYLNGIDTRGILLFRTLIGKIFGS
IGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLSTRWLQVFKSDRDRRDLVTCGCA
AGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKTGNCGHFG
SGGFIIWDLSDGQEDYSFAELLPMAIIGVIGGLLGALFNQLTLYITHWRRNYLHKKGNRV
KIIEACLISVITSVISFGLPLFRKCSACPDSDASIECPRAPGMYGNYVNFFCTKENEYND
LATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYGLAVVTFGTAVPAGQFVPGIMI
GSTYGRLVGMFVVRLYEKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLP
LIMLVLLISKAVGDAFNEGLYEEQARLRGIPLLESRPKNLMRKMTAKEACGNQKVCYFTR
VVKVADVAAILRTNSHNGFPVVDQSRSGETMVIGLILRSHLLVLLQSKADFQHSPLAVDM
RSQSIPIRHSLSDFVKPVSSKGLSISDIHLSPDDLEMYIDLAPFVNPSPYVVPEDMSLTK
VYNLFRQLGLRHIFVVPRASRVIGMITRKDLIFEDNDDSGSVELQSTSVRGRHRGGNRVR
TRNPDVGHPLLNGLLE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgctagcgaaccatcttcagaacggtgttgagaccgccaagctaatttggtctcggttg
cccaacgcggaagatgctagtgatgctgaacttgatgaagatggggttttgagaaacgat
ggattcgatggtgttgaaagtcttgattatgaagtcattgagaactacgcctatcggcaa
gaacaggcgcgaagaggaaagctttatgtttggtactacgtgggagttaaatggttcttt
gctctgcttataggcataggcactggatttgctgctgttcttatcaatatctcagttgag
aattttgctggatggaagtactcatggacatttacaataatacagcgttcatatgtagct
gggtttattgtatatacctccatcaacttggctttagtcttttcatctgtttatatcatt
acccaatttgcccctgcagcagcagggtctggtatacctgaaatcaagggttatttgaat
gggattgatactcgtggtatacttctttttagaaccctaataggaaagatttttggaagc
attggatctgtgggtggtggattggcactcggtaaagaagggcctctagttcatactggt
gcttgtattgcttccttactgggacaaggtggatcaacaaaatatcatctgagtacaagg
tggctacaggtttttaagagtgaccgtgatcgccgtgatcttgtgacatgtggatgtgca
gctggtgtggctgctgctttcagagctccagttggcggtgtattattcgctctagaggaa
gttacatcttggtggaggagtcagctgatgtggcgtgttttcttcacttctgcagttgtg
gcggttgtagtgcgtactgcaatgggatggtgtaagactgggaattgtggccattttggt
tctggaggtttcataatatgggatttgtcagatggtcaagaggactactcgttcgcggag
ttattgccaatggccattattggtgtcataggaggcctccttggagcgttatttaaccag
cttacactttatataacacattggcgtcgaaactatctacacaagaaaggaaaccgagtc
aaaataattgaagcatgtcttatatccgtgataacctcagtgatctcatttgggttgcct
ctttttagaaaatgtagtgcatgccctgactcagatgcttctattgaatgtcctcgtgca
ccggggatgtatggaaattatgtaaattttttttgtaccaaggagaatgaatacaatgac
cttgcaaccatcttctttaatactcaggatgatgctataagaaatctattcagtgcgaaa
accattcacgagtacagcgcccagagcctgctgacctttctggttatgttctatggttta
gctgtggtgacatttggtactgctgttccagctggccaatttgttccaggtataatgatt
ggatctacatatggacgccttgttggcatgtttgttgttaggctctatgaaaagctcaac
attgaagaaggaacatatgctttacttggagctgcctcgtttctaggaggttcaatgaga
atgacagtctcactgtgtgttattatggttgaaattacaaataatttaaagctcttacct
cttatcatgcttgttctcctcatatcaaaagctgttggtgatgctttcaacgaaggttta
tatgaagaacaggcgagattaaggggtatacctttacttgaatccagacccaaaaattta
atgagaaaaatgacagctaaagaggcatgcgggaatcaaaaggtttgttacttcactcgt
gtggtgaaagttgctgatgtagccgctattctgaggactaacagtcacaatggctttcct
gttgtggatcagtcaagaagtggagagacaatggtgataggtcttatcttgcgcagtcac
ttattggtacttctgcagtcgaaagccgattttcagcatagccctcttgcagttgatatg
agaagccaatctatacccatcaggcacagtcttagtgactttgtgaagcctgtctctagt
aaaggactatcaatatctgatatccatctaagtccggatgatttggaaatgtacatagat
ctagccccctttgtcaacccatctccatatgttgtccctgaagatatgtctttaaccaag
gtgtataatctattccgtcagttaggattgaggcatatatttgtagttccacgtgcttct
cgtgtgattggcatgatcaccagaaaggacttgatatttgaggacaatgatgattcaggt
tctgtggagctccagtcaactagtgtaaggggtcgacatcgaggaggcaatagagtgaga
acaaggaatccagatgtcgggcatccactacttaatggtcttttggagtaa
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