Lactuca sativa (garden lettuce): 111896700
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Entry
111896700 CDS
T05352
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04141
Protein processing in endoplasmic reticulum
lsv04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111896700
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111896700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsv03110
]
111896700
04131 Membrane trafficking [BR:
lsv04131
]
111896700
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lsv04091
]
111896700
Chaperones and folding catalysts [BR:
lsv03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
111896700
Membrane trafficking [BR:
lsv04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
111896700
Autophagy
ER-phagy
Other ER-phagy associated proteins
111896700
Lectins [BR:
lsv04091
]
L-type lectins
111896700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
111896700
NCBI-ProteinID:
XP_023748442
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All DBs
Position
1:37707227..37709918
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AA seq
541 aa
AA seq
DB search
MEEREQRMRCSLLFAALLIGCFVTQICSSSDSIFYDSFDESFEGRWIVSENEDYSGVWQH
SKSDGHEDYGLLVSEKARKYAIVKELEKPLDLQDTTTILQFEVRLQQGLECGGAYLKYLR
PQDSGWSAKLFNNESPYSIMFGPDKCGATNKVHFILKHKNPINGEYTEHHLTSPPSVPSD
KLTHVYTAIINPGDNDLRILVDGKEKKKANFLSTEDFQPSIIPEKTIPDPDDKKPKDWDE
RAKIPDPDAVKPEDWDENAPMEILDEEAEMPEGWLESEPEEIEDPESLKPEDWDDEEDGE
WEAPKIENPKCESAPGCGEWKRPMKRNPDYKGKWHAPLIENPNYKGIWKPRQIPNPNYFT
LENPNFDPIAAVGIEIWTMQDGILFDNILIGNDEKVAKSIRDATWKPKFLVEDEKRKAEE
KSTGLDGLKGIQKAVFDVLYKIAELPFLGERKTKVLELVDKAKEQPNLTVGLMVSIVVVV
CSISLKVLFGGKKHGKVKVEVEDGKKDEGERKMRKGGNNEDDHDATGARKRNARREQRQV
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagggagcagaggatgcgttgttcattgttgtttgctgcgcttttgataggt
tgtttcgttacgcagatatgttcttcttcggactctatattttacgattcattcgatgaa
tcttttgaagggaggtggatcgtatctgagaatgaagattattcaggtgtatggcaacac
tcgaaaagcgatgggcatgaagattatggactgctggtgagtgaaaaagctagaaaatac
gccattgtcaaggagctcgaaaaacctctagacctgcaagacaccacaaccatcctccaa
tttgaagtccgccttcaacagggtctggaatgcggtggcgcatatctaaaatatctccgt
ccacaagattccggttggagcgccaaactattcaacaacgaatcaccttattcaataatg
ttcggccctgacaaatgtggtgctacaaataaagtccatttcatcttgaaacacaaaaac
cccattaatggagagtataccgaacaccacctcacttctcctccttcagtcccttccgac
aaattaacccatgtctacactgcaatcataaaccccggggataacgacctgcgaatctta
gtcgacggaaaagagaaaaagaaagcaaatttcttatcaaccgaagattttcagccatcg
atcatcccggaaaagacgattcccgacccggatgataaaaaaccgaaagattgggatgag
cgagccaagattccagacccggatgcggttaaaccggaggactgggacgagaatgctccg
atggaaatcttagacgaggaagctgagatgccggaaggatggctggaatcagagccggag
gaaatcgaggatccggaatcgttaaagcccgaagattgggacgatgaggaggacggcgaa
tgggaggctccaaaaattgagaacccgaaatgtgaatcggcacccggttgtggggaatgg
aaaagaccaatgaaacggaatccagattacaagggtaaatggcatgcacctcttattgaa
aaccctaattataaaggaatctggaagccacgacaaattccaaaccctaattactttaca
cttgaaaaccctaatttcgacccaattgccgctgttggtatcgagatttggaccatgcaa
gatggaatcttgtttgataacattttgatcggaaacgacgaaaaggtcgcaaagtcaatc
cgggatgccacgtggaaacccaagtttttggttgaagacgagaaacgaaaagcggaggaa
aagtcaaccggtttagatggtcttaaagggattcagaaagctgtgtttgacgttctttac
aagatcgctgaactgccttttctgggcgaacgtaagacaaaggttttggagcttgttgac
aaggctaaggaacaaccgaatcttacagttggacttatggtttcgattgttgttgtggtt
tgtagtatctcattgaaggtgttgtttggtgggaagaaacatggtaaggtgaaagtggaa
gtggaagatgggaagaaggatgaaggtgagaggaagatgaggaaaggagggaataatgaa
gatgatcatgatgcgaccggtgctcgtaagagaaatgcaagacgtgagcaacgacaagtt
gactga
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