Lactuca sativa (garden lettuce): 111896742
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Entry
111896742 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111896742 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111896742
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111896742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
Motif
Other DBs
NCBI-GeneID:
111896742
NCBI-ProteinID:
XP_023748496
LinkDB
All DBs
Position
3:39069869..39081163
Genome browser
AA seq
2548 aa
AA seq
DB search
MESPPQQAVMEMETDLLSRLTANHLFLGQIEPFRATILALRSRNPDLARAILQTIVASGG
RYETILFSSNSSPALLTYLCTLELLQFNDPTSRVWSFDSATLRLRAEFLLYVQTITSRVL
ETKKVIDNLGQNEMDIANLDSIKRDGTGTSERLEESRWGASGTSIRDIDSKQQFSGSKGD
TSEMDINDFDSRTGHLADQDVASAKHWDFQECLRVLNKISEVGFKRLRPDLIELDVKESE
EEGTSGATLEIEEGEMVCLRGVILENAVIFQALCENISKQVKWVQGNDGGDDSGLAISPT
LQEEDVKSLELIQSYAQMVHLSAMKECLKEGNNDGAMSHIQFLHFDYGVEEADYRMVLQD
LLKRGLSGMTAYDDTWLSMRSKLLSIYEKALSSKSIRLVNMIQSIQEELLSEEIETHKVL
NGNQIPPPLARLLSFIAQMTPDPSGDQTSSFKSAISACMRDMYHYARISGLHVLECVMDV
ALSAVKREQLQEASNILSLYPQLQPLVAVMGWDLLPGKTDMRRKLMQLLWTSKSQILRLE
ESSLYGNKSDEVSCVEHLCDFLCYQLDLASFVACVNSGQSWSLKSSLLLSGKGNTTEFEN
QELQLDPFVENLVLERLSIHSPLRVLFDVVPDIRFQDAIELFSMQPITSNLAAWKRMKDV
ELMHMRYAMESAVLALRAMGNSKNNEVKSYQMALCYLKDLRIHLEAVTNIPRKIMMVNII
ISLLHLDDLSRDSSPSPPPRTHPDTSSTSEESGDQCTNEEGNTMVVSFTGGLLNILRQNL
PSGVTEQEIAIDGNVPTDGRQALEWRISKARSFIEDWEWRLSILQSLLPLSDRQWKWEEA
STVLRAAPSKLLNLCMQRAKYDIGEEAVNRFSLTPEDKATLELAEWVDGAFKRASAADAV
SRAADETSVVQDLDFSTLRSQLGPLVATLLCIDVATASSKSSALSQKLLDQAQVMLSEIY
PGRAPKMGATYWDQIYEIGIISVVKRLLKRLQELLEQEKFPVLQALLTGDLISTKNFQRQ
GPRERALAMLHQMIQDAHMGKRQFLSGKLHNLARAIADEEYEREFMRAESTYPDEKDGVV
GLGLRPMRQQSSVEKSTASKEAEKRIYGPLTSKATTYLSQFILHIAAIGDIVDGTDTTHD
FNYFSLIYEWPKDLLTRLVFDRGSTDAAAKVAEIMSADFVHEVISACVPPIYPPRSGHGW
ADIAVIPTCPKSSSEGKLLSPSSKEAKPSSYCPSSATPGVPLYPLQLDVVKHLVKLSPVR
AVLACVFGNCILYGGNDYSSTMSGSLTDGPGSVQKHDADRLFFEFALDQSERFPTLNRWI
QMQTNLHRVSEVAVTAEHSVNDGIEVKTSVKRFREHDSDSDLEHDELAAVGTSSLSVLTD
TTNESGIWQDSPKSEAAEIDTTVFLSFGWENEKPYEKAVERLIEEGKLMDALALSDRCLR
DGASDHLLKLLIEREEENHTVFNASSHSNFRIPSNSWQYCRRLKDKQLAAKLALKYLHRW
ELDAALDVLTMCHCHLLETDPSKNEVVLRRQALMRYSHILSADERYNSWQEVEAECKEDP
EGLALRLAEKGAVSAALEVAESAGLSIDLRRELQGRQLVKLLTADPITGGGPAEASRFLS
SLRDSEDALRVAMGAMQQLPNLRSKQLLVHFFLKRKDSNLNEPELSRLNLWALGLRVLAI
LPLPWQQRCSALHEHPQLILEVLLMRKQLHSASLILKEFPSLRDNNKIFRYAAKAIAVTI
APPRRETRIQVSGPKAKQKAGGTPTKSSFSNSLSNLQKEARRAFSWNPRNSAEKTAPKDV
QRKRKGSGLTQTERATWEAMAGIQEDRVSSYTMDGGQDRLPSVSIAEQWMLTGDPNKDEA
VRSSHHYESAPDIILFKELLSLCSDESTSAKGALDLCVNQMRAVLSSETLPENASMETIG
RAYHATETFLQGLLYAKSQLRKLSVGNDFSVLSKDMEDTSSDAGSSSMGSQAPDELSETL
SHSDTWLRRAELLQSLLGYGIAASLDDIADEESSGRLRDRLILEERYSMAVYTCKKCKID
AFAVWNAWGLALIRMEHYAQARVKFKQALQLYKGDPAPVIQDIINTIEGGPPADVSSVRS
MYDHLAKSAPAILDDSLSADSYLNVLYMPSTFPRSERSRRLQEASNENSVNSSEFEDDVP
RSNLDSIRYLECVNYLQEFTREDLLEFMFRHGHYKDACMLFFPENSVPTPPQVSSTPQKP
DPLSTDYGSIDDLCDLCVGYGAMSVLEEVMASRMSSETADVAVKQYTGAALSRICVFCET
HKHFNYLYRFQVIGNDHVAAGLCCIQLFVNSSALDEAIKHLENAKMHFDEALSERYKSGG
STKLVSKGVRAQKLTAEGLIKFSARVSMQVDVVKSFNDTDGPQWKYSLFGNPNDAETFRR
RCEIAETLVEKNFDLAFQVIYEFKLSAVDIYAGVASSLADRKKGGQLTEFFRNIKGTIED
DDWDQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASRSGSVAD
VQYVAHQALHANALPVLDMCKQWLSQYM
NT seq
7647 nt
NT seq
+upstream
nt +downstream
nt
atggaatctccaccgcaacaggcagtgatggaaatggaaacagacctgctttctcgtctc
acagcaaaccatttgttcttgggtcaaatcgaaccgtttcgagctaccattctcgctctc
cgatctcgaaaccccgacctagctcgcgctatcctccaaacaatagtggcgagtggtggc
cgttatgagactatccttttcagctctaactcttcccctgctcttctcacttatttatgt
acccttgaactcctccaatttaatgatcctacatcgcgagtttggagttttgactcggct
actttgcgtttgcgcgctgaatttttgctttatgttcagactattacgtctagggttttg
gaaactaagaaagtgatcgataatttaggtcaaaatgaaatggatattgccaatctcgat
tcaattaagagagatggaacgggtactagtgagaggcttgaggagtcgagatggggcgcc
agtggaacgagtattagagatattgattcaaaacagcagttcagtgggtcaaaaggggat
accagcgaaatggatattaatgattttgattcaagaactgggcacttagctgaccaggat
gttgccagtgctaaacattgggattttcaggagtgcttgagagtattgaacaaaatctcg
gaggtggggttcaagaggttgaggccagatttgattgaactggacgtcaaagagagtgaa
gaagaggggacctctggtgctactctagagattgaagaaggtgaaatggtgtgtttgagg
ggagtaattttggaaaatgctgttatttttcaggcactgtgtgagaacatatcaaagcag
gtaaagtgggtacaagggaatgatggtggtgatgattcaggtttggctatttcaccaaca
cttcaagaagaggatgttaagtctcttgaattgatacaaagctatgctcagatggtgcat
ttgagtgccatgaaggaatgcttgaaggaaggtaacaatgatggagccatgtcacatatt
caatttcttcactttgattatggtgtggaggaagctgattaccgcatggttttgcaagat
ctcctaaagaggggtttatcaggaatgacggcctatgatgacacctggctttccatgcga
agtaaattgctgtcaatatatgagaaagcactctcatcaaaatcgatacgtcttgtaaac
atgatacagtccatccaggaagaattgttatcagaagagatagagacacataaagttttg
aatggcaaccagattccaccccctcttgcacgacttttaagttttattgcacagatgaca
cctgatccatcgggtgaccaaacatcatcctttaagtcggctatatctgcatgcatgaga
gacatgtatcattatgcccgtatttctgggttgcatgtacttgaatgtgtcatggatgtt
gctctttctgctgtcaaaagggaacaacttcaagaagctagcaatattctttcattatac
ccccaacttcaaccacttgtggctgttatgggttgggatcttttgcctgggaaaacagat
atgagaaggaaattgatgcagcttttgtggactagtaaatcacaaattctaaggctggaa
gaatcttctctttatggtaataaatcagatgaggtgtcttgtgttgaacatctttgtgac
ttcctatgttaccagcttgatctggcttcttttgttgcatgtgtcaattctggacaatca
tggagtttgaaatcatcattactcttgtctggaaaagggaataccaccgagtttgaaaac
caagaattgcagttggatccatttgttgaaaatcttgttcttgaaagattatcgatccat
agcccacttcgagttttgtttgatgtagttccagacataagatttcaagatgctattgag
ttatttagcatgcaaccaatcacctctaatttagcagcctggaaaaggatgaaagatgtt
gaacttatgcacatgcgctatgccatggagtctgctgttcttgccttaagggctatgggg
aatagtaagaataatgaagtaaaaagctaccaaatggcattatgttacttaaaagacctc
aggattcatttggaagctgtcaccaacattccacgcaagataatgatggtgaacattatt
atttcacttttacatctggatgatctttctcgcgactcatcaccctctccgccacctagg
acgcaccccgacacatcatccactagtgaggaaagtggcgatcaatgcaccaatgaagaa
gggaatacaatggtggtatccttcacaggtggactccttaatatactgagacaaaatcta
ccttcaggtgttactgaacaggagattgcaattgacggaaatgtccctactgatgggaga
caagctttagagtggagaatctcaaaagcaagatcttttattgaagattgggaatggcgt
ttatcaatcttgcaaagtcttctgcccttgtctgatcgtcaatggaaatgggaagaggca
tccactgtcttacgtgcagccccatctaagttgcttaatctttgcatgcagagggcaaag
tatgacataggagaagaggctgtaaaccgtttttccctaactccagaagataaagcaact
cttgaactggctgaatgggtggatggagcctttaagagagcatctgctgcagatgctgtt
tctcgtgctgctgatgaaacttctgtcgtccaagacttggatttttccactcttcgctct
caattgggtcctttagttgcgactcttctatgtatcgatgtagctacagcatcttcaaag
tcctcagctttgtctcagaagcttctagatcaggctcaagtcatgttgtcagagatctat
cctggacgtgctcctaaaatgggagctacttattgggaccaaatttatgaaattggaata
atttcagttgtgaagcgtcttctcaaacgtctacaagagttgttggaacaggagaagttt
ccggtacttcaggctcttttaacaggagacctaataagtaccaagaatttccaaaggcaa
ggacctagggagcgtgctctagctatgcttcatcaaatgattcaagatgctcacatgggg
aaacgccagtttcttagtggtaaacttcataatcttgcaagagcgattgctgatgaagaa
tatgaaagagaatttatgagagcagagagcacgtatcctgatgaaaaagatggagttgta
gggcttggattgagacccatgagacaacaatcatcagttgaaaagtcaactgcttctaaa
gaggctgaaaagagaatatatggcccgttgacttcaaaagctacaacatacctttcccaa
tttatcctccatattgcagctattggagacatagttgatgggacagatactacacatgac
ttcaactatttctctctgatatacgaatggcctaaagatcttttgactcgtttggtgttt
gaccgaggtagcactgatgcagctgcaaaagtagctgaaattatgtctgctgattttgta
catgaagtgatttctgcatgtgtacctccaatatatccaccaagatctggtcatggttgg
gcagacatagcagtcatccctacatgtcctaaaagtagttcagagggtaaacttttatcc
ccatcttcaaaagaagccaagccgagttcttattgtccgtcctcagccacacctggagtt
cccctgtaccctcttcagctagatgttgtaaagcatcttgtgaagctgtcaccagtcagg
gctgttttagcatgtgtttttgggaattgtattttatatggtggcaacgactactcatca
accatgtcaggctcattgactgatgggccagggtcagtccagaagcatgatgctgataga
ttgttctttgagtttgcacttgatcaatccgagaggtttccgaccttgaatcggtggata
caaatgcaaactaatcttcaccgagtttcagaggtagctgtaactgctgagcattcggtt
aatgatggaattgaggtgaaaacttctgtgaagaggtttcgggagcatgatagtgattct
gatttagaacatgatgagctggcggcggttggcaccagcagcctttctgttcttacagac
actacaaatgaaagtggtatatggcaagattcacccaagtcagaagctgctgaaattgat
acaacagtttttctctcttttggatgggagaatgaaaaaccgtatgaaaaagctgttgaa
agattgatagaggaaggaaaactaatggatgctcttgctctttctgatcgatgcttacgt
gatggtgcttcagatcatttactgaagttactcattgagcgtgaagaggaaaatcataca
gtattcaatgcttcaagtcactcaaactttagaattccaagcaatagctggcaatattgc
agacgactaaaagataaacaacttgcagcaaaacttgccctcaaatatttgcataggtgg
gaattagatgctgctttagatgttctcaccatgtgtcactgtcacttgctggaaaccgat
ccttccaagaatgaggttgttctcagaagacaagctttgatgcggtacagtcacatatta
tctgcagatgagcgttacaacagctggcaagaggtggaggcagagtgcaaggaagatcca
gaaggtcttgcacttagattagccgaaaagggagctgtttcagctgctttagaagttgct
gaaagtgcagggttatcaattgaccttcgtagagaacttcaggggcgccaactcgtgaaa
cttcttacagcagaccccataacaggtggcggcccagcagaagcttcacggtttctatct
tcccttcgcgattcagaagacgcattaagagttgcaatgggcgcaatgcaacagttgcca
aatcttcgatccaaacaattactcgttcattttttcttgaaaagaaaagacagcaacttg
aacgaaccggagctttcccggcttaatctatgggcgttaggccttcgcgtattggctatt
ttacccttgccatggcagcaaagatgctctgcattacacgaacatccccaactaattctg
gaagttttactaatgcgcaaacaactccattctgcttctttgatacttaaagaattccca
tcattaagggacaacaataaaatatttagatacgctgcaaaagcaattgctgtgactata
gcccctccacgtcgtgagactcggatacaggtgtcaggtcctaaagcaaagcagaaagca
ggaggaactccaacaaaatcttctttttctaatagcttaagtaacttgcaaaaggaggca
cgcagggcgttttcttggaacccaaggaacagtgctgaaaaaacagctcctaaagacgta
caaaggaaaagaaaagggtctggattgacacagactgaaagagctacatgggaggctatg
gctgggattcaagaagatcgtgtttcgtcatacacaatggacggagggcaagatcgtctt
ccttccgtttccattgctgaacagtggatgctcacgggcgacccgaataaagacgaagct
gtccggtcctcgcatcattacgaaagtgcccctgacattattctattcaaggagctgctt
tctctgtgttcagacgagagtacatcagccaaaggtgctttggatttgtgtgttaatcaa
atgagagctgttttaagctccgaaacgttacccgaaaacgcatcaatggaaaccatcggt
cgtgcttatcatgctacagagacatttcttcaggggctcctttacgcgaaatctcaactt
agaaaactttctgtgggaaatgacttttctgtcctttctaaagacatggaggacacgtcc
tctgatgcagggagttctagcatgggcagtcaggctccagatgagctttctgaaacccta
tcacattccgacacctggcttagacgcgcagaacttttgcaaagccttttgggatacgga
attgctgcttcacttgatgatattgctgatgaggaatcttccggaaggttgcgtgatcgg
ttgattctagaagaacgatatagcatggctgtgtatacttgtaagaaatgcaagattgat
gcgtttgctgtgtggaatgcatggggacttgctctaattagaatggaacactacgctcaa
gctcgtgtcaaattcaagcaagcacttcaactgtacaagggtgaccctgctccagttatt
caagatatcattaatacaatcgaaggtggccccccagctgatgtctcatctgttcgttcc
atgtatgaccatttggctaaaagtgcacctgcgatcttggatgattctctttctgctgac
tcgtatctgaatgttttatacatgccatctacttttccacgatcggaaaggtctagaaga
ttgcaagaagcttctaatgaaaattcagttaacagttcagaattcgaagatgatgttcca
cgtagcaatctggatagcattagataccttgaatgtgtcaactatttacaagaatttaca
cgtgaagatttgcttgagtttatgtttagacatggtcattacaaggatgcatgcatgcta
ttttttccggaaaattccgttcctacccctcctcaagtatcatccaccccacaaaaacca
gatcctttatcaaccgactatggatcgattgatgatttgtgtgacctgtgtgttggttat
ggagccatgtctgttctagaagaagtgatggcttctagaatgtcctcggaaacagctgac
gtggcagtgaagcagtatacaggagctgcgctcagccgcatatgcgtgttctgtgaaact
cataaacacttcaactacctatacagattccaggtgatagggaacgatcatgtggctgct
ggactatgttgtatccagttatttgtgaattcatctgctcttgatgaagctataaaacac
ttggaaaatgcaaaaatgcattttgatgaagcgttatcagaaagatacaaaagtggaggc
tcaactaagcttgtgagcaagggtgtacgtgcacaaaaacttacagcagaagggctaatc
aaattttctgcccgagtttccatgcaggtggatgtggttaaatcgtttaatgatacagac
gggcctcaatggaaatactctctttttggaaatccaaacgatgcagaaactttcaggagg
aggtgtgagattgcagaaactctagtggagaagaatttcgacctagctttccaagtgata
tacgagttcaagctttctgctgttgacatatatgctggtgtcgcatcatcccttgctgat
aggaaaaagggcggtcaattgactgaatttttcagaaatatcaagggtacaattgaagat
gacgactgggatcaggttttgggagcagctattaatgtatatgccaacaaacataaagaa
cgacctgatcgtcttattgacatgttaactagcagccacaggaaggttttggcttgtgtg
gtgtgtggtcgtctaaaaagtgcgttccagattgcttctagaagtggaagtgtggctgat
gttcagtatgttgcacatcaggcattacatgcaaatgcacttccagtgctggatatgtgc
aaacaatggctgtctcagtacatgtaa
DBGET
integrated database retrieval system
