Lactuca sativa (garden lettuce): 111896757
Help
Entry
111896757 CDS
T05352
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111896757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111896757
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111896757
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
U-box type E3
111896757
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
PUB10_N
ARM_PUB
U-box
ARM_ARMC5
zf-RING_UBOX
HEAT_2
PUB2_N
zf-Nse
Neurochondrin
zf-C3HC4_4
RPW8
KAP
zf-C3HC4_2
MLKL_N
zf-C3HC4
zf-RING_2
zf-rbx1
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
111896757
NCBI-ProteinID:
XP_023748511
LinkDB
All DBs
Position
8:114678497..114682069
Genome browser
AA seq
648 aa
AA seq
DB search
MAEEGEKGGLIQKLIAIVNEISAISDYQYTVKKLFSNLARRLKLLTPLFEEIRDIKEPLS
DDSHQALVSLMEAMESAKELLRIGSEGSKIYLVLERDQIMTRYQEVTARLEQDLSGISFD
NLDISDEVKEQVELVLAQFRRAKGRIDPPDVELYEDLSSLYNKNINVEEDPAVLNRLAEK
LHLTEITDLTHESIALHEMVTITGDPEETVEKMSSLLKRIKDFVQTETHDPKVETSHLPS
CTQGTVVKNLKNSIIPDDFRCPISLELMKDPVIVSTGQTYERTCIEKWLEQGHSTCPKTQ
QKLTSTALIPNYVLRSLIAQWCETNGMEPPKRAKQSASACTPAERSMIENLLRKLNSISP
DDQRTAAGEIRLLAKRNADNRVAVAEAGAIPLLTHLLTAPDSRTQEHAVTALLNLSICED
NKGSIVSSGAVPGIVQVLRKGSMEARENAAATLFSLSVIDENKVTIGSLGAIPPLVLLLS
EGTQRGKKDAATALFNLCIYQGNKGRAVRAGVVPMLMELLTEAHGGMKDEALAILAILSS
HPEGKLAIGKAEAVPVLVEVIGSGSPRNKENAAAVLVHLCSGDQKYLVEAQELGVMGKLM
DLLHHGTDRGKRKAGQLLEKITRLVKQKLLAPGDHLPTEAHPQLPSNS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaggagagaaaggtggactgattcagaaattgattgctattgtaaacgag
atatctgcaatctctgactaccagtatacagtgaagaagcttttctctaatctagctagg
aggttaaagctcttaactccactatttgaagaaatccgtgatattaaggagccactctct
gatgattctcatcaagccttggtttcgttaatggaggctatggaatctgctaaggaatta
cttcgaatcgggagtgaaggcagcaagatatatttggtcttggagagagatcaaatcatg
actagatatcaggaagttacagctcgattggaacaagatctgagtggaatttcttttgat
aatcttgacatctcagatgaagtaaaagaacaggttgagcttgttcttgctcaattcaga
agagcaaaaggaagaatcgatccaccagatgttgaactatatgaagatctctcctctctt
tacaacaaaaacatcaatgttgaagaagatccagctgtcttaaaccgattggctgaaaaa
ctacacctaacagaaataaccgaccttacacacgaatcaatagcattacacgaaatggta
accataactggagatccagaagaaactgtagaaaaaatgtcatcactactaaaacgcatc
aaagatttcgtacaaacagaaactcatgatccaaaagtagaaacttctcatcttccaagt
tgcacacaaggaacagtagtcaaaaatctcaagaacagcatcataccggatgatttccgt
tgccctatatcactcgagttaatgaaagatcctgtcatcgtctccacaggacagacgtat
gagcgaacatgtatagagaaatggctggaacaaggccacagcacatgtcccaaaacgcaa
caaaagttaaccagtactgcactcataccaaactacgtattacggagcttaatagctcaa
tggtgtgaaacaaacggaatggagccaccaaaacgagccaaacagtcggcttccgcttgc
acaccggcggagcgttccatgatcgaaaacctcctccgtaaacttaactccatcagcccc
gatgaccagagaaccgccgccggagaaatccgcctcctcgcaaaacgtaacgccgacaac
cgcgtagccgtggcggaggctggtgcgatcccgctactgactcacctcctcacagcgccc
gattcccggacgcaagaacacgcggtgaccgctcttcttaacctctcgatttgtgaagac
aacaaagggagtatcgtgtcctccggcgctgtcccggggattgttcaggtgttacggaaa
ggtagcatggaagcgcgggagaatgcggcggcgacgctgtttagtctctctgtaatcgac
gaaaacaaggtgacgataggttcgttaggagcgattccgcctcttgtgttgttgttgagt
gaaggcacacagagagggaagaaggacgctgcgacggcgttgtttaatttatgtatttat
caggggaataaagggagggcggttagggcgggggtagttccgatgttgatggagcttttg
acggaggcacacggcgggatgaaggatgaggcgttggcgattttggcgatcctatcgagc
catccggaagggaaattggcgatagggaaagcggaggcggtgccggttttggttgaggtt
atcggaagtggatctccgaggaataaagagaacgcagcggcggttttggtccacctttgt
tccggtgatcagaagtatttggtggaggctcaagagcttggggttatggggaaattgatg
gatttgttacatcatgggactgatagagggaagagaaaagctggacagttactggaaaag
attacaagattagtaaaacagaaactgttggctccgggagaccacttgccgacggaagct
catccgcaattaccttctaatagctga
DBGET
integrated database retrieval system
