Lactuca sativa (garden lettuce): 111896849
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Entry
111896849 CDS
T05352
Name
(RefSeq) coronatine-insensitive protein 1
KO
K13463
coronatine-insensitive protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111896849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111896849
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111896849
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
Motif
Other DBs
NCBI-GeneID:
111896849
NCBI-ProteinID:
XP_023748599
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Position
9:complement(88053697..88057535)
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AA seq
593 aa
AA seq
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MDGRSYNHHRVHMSDVVFECVIPYIHDSRDRQSVSLVCRRWYELEAQTRKQVMIALCYTA
TPKQLWRRFPYLESLKLKGKPRAAMYNLIPEDWGGFVTPWVEEIARSFVCLKAVHFRRMI
VKDDDLELLARSRGHVLQVLKLDKCSGFSTDGLLHICRSCRNLNTLFLEESQVIEKDGEW
LHELALNNTVLETLNFYMTDLSCVNIKDLELIAKNCRNLVSVKIGDCEILDLVDFFRAAV
SLEEFGGGCFNDQAEQYASMSYPPRLCLLGLNYMSTNEMPIVFPFASRLKKLDLLYALLD
TEDHCRLLPMCPNLEVLETRNVIGDRGMEVLANCCKKLKRLRIERGADEQEMEDEEGIVS
QRGLTALSQGCIQLQYIAVYVSDITNAALESMGIHLKNLCDFRMVLLDREEIITDLPLDN
GVRALLNGCHKLKRFALYLRPGGLTDVGLTYIGQYSQNVRWMLLGYVGESDDGLLGFSKG
CPSLQKLEVRGCCFSEQALAIAVLQLRCLRYLWVQGYRGSSTGCDLLTMARPFWNIEIIP
SRRVVVVGEDKEDEQPAHILAYYSLAGPRTDFPPSVISLDSIPVLDSIPVIDE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggatggtcggagctacaaccaccaccgtgtacacatgtcggatgtggttttcgagtgt
gtgattccatacatacacgactcacgcgaccgtcaatcggtatccttggtctgccggaga
tggtacgaactggaagcccagacacgtaaacaggtgatgattgcgttgtgttatacggcg
acaccgaagcagctatggcggaggttcccctaccttgagtcactgaaactgaaagggaaa
ccgcgagctgccatgtataacttgatcccggaggattggggtgggtttgtgacgccgtgg
gtggaggagattgcgagatctttcgtttgcttaaaagctgttcactttagaaggatgatt
gttaaagatgatgatcttgagctacttgcacgttcacgtggccatgttcttcaggttctt
aagcttgataagtgctctggtttttccaccgatggtttattgcatatatgtcgatcttgc
aggaatctgaatacattatttctagaagagagtcaagtaatagagaaagatggagagtgg
ctacatgaacttgcattaaacaacactgttcttgaaacattgaacttttacatgacagat
ctttcttgtgttaatatcaaagatcttgaacttatagccaaaaattgcaggaatttagtt
tcagtcaaaataggtgattgtgaaatcttggatcttgttgatttctttcgtgctgctgtt
tcacttgaagaatttggtggaggttgttttaatgatcaagcagaacaatatgcttcaatg
tcttatcctccaagattgtgtcttttaggtttaaattacatgagtacaaatgagatgccc
attgtgtttccatttgcatcaaggcttaaaaagttggatcttctttatgcgcttcttgat
acagaggatcattgccgattgcttccaatgtgtcccaatcttgaagttcttgagacaaga
aacgtaatcggagatcgcggaatggaagttcttgctaattgttgcaaaaaattaaaacga
ttacgaatcgaacgaggtgcagatgaacaagaaatggaagacgaagaaggaatcgtttct
caaagaggcttaacagctttatcacaaggttgtatccaattacaatacattgctgtatac
gtatcagacatcacaaacgcagctctcgaatccatgggaatacacctaaaaaacctctgc
gatttccgcatggtgttgctagacagagaagagataattaccgatttacccctcgacaat
ggagtccgagctttactcaacggttgccataagcttaaacgattcgctctgtatcttcga
cctggaggtttgaccgatgtgggtttgacttatatcggtcaatacagtcaaaatgtacga
tggatgctattaggttatgttggcgaatctgatgacgggcttttagggttttcaaaaggg
tgtccgagtttacaaaaattggaagtgagagggtgttgttttagcgaacaagcacttgcg
attgctgttttacaattgagatgtttgaggtatttatgggttcaagggtatagagggtca
tctactggatgtgatttgttaacaatggcgcgacctttttggaatattgaaataattcct
tctagaagagtcgttgttgttggggaagataaagaggatgaacaacctgctcatatactt
gcttattactctcttgctggacctagaacggatttcccaccttctgttatctcacttgat
tccattcctgttcttgattccattccggtgatagatgaatag
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