Lactuca sativa (garden lettuce): 111896944
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Entry
111896944 CDS
T05352
Name
(RefSeq) heat stress transcription factor A-5
KO
K09419
heat shock transcription factor, other eukaryote
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111896944
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
111896944
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GFIT
Motif
Pfam:
HSF_DNA-bind
TMF_TATA_bd
DUF3450
DUF7801
APG6_N
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
111896944
NCBI-ProteinID:
XP_023748685
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Position
1:89622926..89624788
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AA seq
439 aa
AA seq
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MEGNQAVSGGGGGGGGGGPAPFLLKTYDMVDDSMTDEIVSWSTNRNSFVVWNPPEFARLL
LPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEEFAKDQKHLLKNIHRRKPIHSHSNP
QSSTIDPERAAFEEEIDKLTREKTSLEKNITRFKQQQPVSKLQVEDLTHRVNTIEERQDT
LLTFLKKAAQNPDFVEHLAQKLESMDFSADNKKRRFFPEDNNNTNTNSLPQSPSRPDFGN
IFHRDFSNKLRLELSPAVSDINFVSNSTQSSNEDNGTGSPQIIVSERTHGSLPFNQETQE
LSDSCTSFGFNMDSSFINKTCLDSNKDTTKGHDSCQLNLTLASCVSQIDTCQDTDTMPQS
FEEIGKPPEWAAAAARVPEKNTTPAAPVAPAAAQTRVNDVFWEQFLTERPGSLDVEEASS
NLRANSSFENSRNLQNLTL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtaatcaggcggtatccggcggcggaggtggaggaggtggaggaggaccagct
ccctttcttctaaagacgtacgatatggttgacgactccatgaccgatgaaatagtgtcg
tggagcacaaacaggaacagtttcgttgtgtggaaccctcctgaatttgctcgcctgttg
ttgccaacttatttcaagcacaataacttttccagcttcattagacagctcaatacatat
ggtttcaggaagatcgatcctgaaagatgggaattcgcaaacgaagaattcgctaaagat
caaaaacaccttctgaagaacattcatcgaagaaaaccaattcacagccacagtaatcca
caatcttcaaccatcgatcccgaaagagcagcttttgaagaagaaatcgataaactcaca
cgtgaaaaaacttcactcgaaaaaaacatcacgagattcaaacaacaacaaccagtttca
aagctccaagtcgaagacctcactcaccgagtcaacaccatcgaagaacgccaagacaca
ctcctaacattcctcaaaaaagccgctcaaaatcccgattttgtcgaacaccttgctcaa
aagctcgaatcaatggatttttcagccgataacaaaaaaagaagatttttccccgaagat
aataataatactaataccaatagtctccctcagagcccatctagaccagatttcggaaac
atttttcatcgtgatttttcaaataagcttcgattagagttatcgccagctgtttctgac
ataaactttgtatcaaacagcactcaaagctcaaacgaagataatggaactggaagccct
caaatcatagtatctgaaaggacacatggcagccttccatttaatcaagaaacccaagaa
ctttcagatagctgcacttcatttggcttcaacatggattcttctttcataaacaaaaca
tgtttagattccaataaagacaccaccaaaggccacgattcatgtcaactgaatctaact
ttagcatcttgtgtttcacaaatcgacacgtgtcaggataccgacacaatgccacagtca
tttgaggagatcggaaagccgccggagtgggcggcggcagccgccagagtcccggaaaag
aacacaactccggcggctccggtggcacctgcagctgctcagacgagggttaatgatgtt
ttctgggagcagtttttgactgaaagaccgggttctttggatgttgaggaagcgagttcg
aatctgagggcaaattcgtcatttgagaattcgaggaatttgcagaatctgactctttga
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