Lactuca sativa (garden lettuce): 111896950
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Entry
111896950 CDS
T05352
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111896950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111896950
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
111896950
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
111896950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
HIRAN
FAN1_TPR
RNF220
DUF4518
Sgf11
Motif
Other DBs
NCBI-GeneID:
111896950
NCBI-ProteinID:
XP_023748691
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All DBs
Position
1:complement(88243631..88248506)
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AA seq
956 aa
AA seq
DB search
MKIRSKSNSNRTMLTGHESLIRLIGKRRRFLPNRQSLLSDPIQLSSSLVKVENEAEDLSE
ERNDNLAGTSGSDKVTCPVCGNKVRGEEYMINSHLDACLTRGTKRKLSQQTLLQFNFSPR
SKVQACLTKSDDTKSNIISDVKDITELIEVDTEETDSIIYESSSSSDNASLVNIDGSAEI
SVNDDTVNYGGIVNSPSLVSEIEASENESGDLDDDISGKILATFIVGRKFGEEGELHTET
SITFCRDPENIKDPNAIKVLSGESECNKVLGYIPRELAEHLSKLMDTFGLTFEGRIMSVP
EHSHAAVPIQIWCQEKTPYSEIEGEKVKLYKSLCQQVLATVRLSEESPPGMMKYQQNFCL
LLQEVLRTTPHVFTHDEKTLLENFLLLSNDSQKLFIRLYTRKGPWFRMSNISYAEILDHQ
SAVKELSAGGYVCSTETTSELHKDDFERILNLLNVGELREMLSLIKKKHSQSPRKQDSIS
ALLSAYEEKSRLLLKKMVLEKTGSCIRISPAADLLIWRVERLFFCNGEQDLSAFLLVDLG
IVKYPTYNCVITDQIFSNRNDLLSYEEALEVAQIMDESLEENNSSMVLKCIAISDSHISI
QTSKNSSAPFQCFSASWVYSKVVLLGVSFLESERRYNDAINLLKRLLLNFRNDRRRGYWT
LRLSTDLEHLGRVNESLSVAETGLDDPWVRAGSKISLQRRVLRLGKPPRRWKVPSFSDSI
KRKIPEVHVEGRPLNCKTGTKSRFYGEDGEQCGVEELALQYYAGEEGGYWKGVHSESGIW
LTVFGILMWDAIFADVANVFLTRFQTSPLDLETDYFYESRKNIIESLLVKIQQGMGEEML
ITSWELHFGTACRCVNWNRHSLTELRAVVSCIGGGCLASICRHLAQDYRSWSSGMPDLLL
WRFHSDYSGEAKLVEVKGPRDRVSEQQRAWLLFFMDSGFNAEVCRVNPPVANKVFV
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaggtcaaagtcaaatagtaatcgaacgatgcttaccggacatgaaagtttg
atcagattaatcggcaagcgccgacgattcctcccaaatcgtcaatctcttctgtcagac
cccattcagttatcttcgagtctcgtgaaagttgaaaatgaagcagaagatttgtcagag
gaacgcaatgataatttggcggggacttcgggttccgataaggttacatgtccggtttgc
gggaataaggttcgaggagaagagtacatgatcaactctcatttagatgcatgtttaaca
agagggaccaaacgaaaattaagccagcagacacttctccagttcaacttctctcccaga
tcaaaggtccaagcttgcctgaccaaatcggatgatacaaagtccaacattatcagtgat
gttaaagatataacagaattaattgaggttgatactgaggaaaccgacagtatcatatat
gagtcatcttcaagttcagacaatgcttcacttgttaatatagatggttcagccgaaatc
tcagtgaatgatgacactgtaaattatggtggaatagtcaattctccttcattggtttct
gagattgaggcctctgaaaatgagagtggtgacttggatgatgacatatctgggaagatt
cttgcaaccttcattgttggcagaaagtttggtgaagaaggggaattacatacagaaaca
agtattaccttctgtagagatcctgaaaatattaaggaccctaatgccattaaggttctt
tctggagaatctgaatgcaataaagtgcttggttatatacctcgagagctagctgaacat
ttgtcaaaactaatggacacatttggcttgacctttgagggtcgtatcatgtctgttcct
gaacactctcatgctgctgttccaattcagatttggtgtcaagaaaagactccttatagt
gaaatagaaggcgaaaaagttaaactctataagtcattatgtcaacaagttttagccact
gtcagattaagtgaggaatcccctcctggcatgatgaagtaccaacaaaacttttgcctg
ttgctacaagaggttttgaggacaactcctcatgttttcacacatgatgaaaagaccctt
ttagaaaatttccttttgctttctaatgatagccaaaagctctttattcgtctttataca
cgaaaaggtccatggtttcggatgtctaatatatcttatgctgaaatattggatcaccaa
tcagcagtgaaggaactctctgcaggaggttatgtttgttccactgaaaccacaagtgaa
ttacataaagatgattttgaaagaatcttgaatcttctcaatgttggtgaactacgggaa
atgttatctttgattaaaaagaaacacagtcaaagtccacgcaaacaggattctatttct
gcacttctttctgcatatgaagagaaatcaaggttattgttaaagaaaatggtcttggag
aaaacaggatcttgcatacgtatttctccagctgctgatttgctaatttggcgtgttgag
aggcttttcttctgtaatggggaacaagatctgtcagcatttttacttgtggatttggga
attgtcaagtatccaacttacaattgtgtaatcactgaccagattttttctaaccgaaat
gatctattatcttatgaagaggcacttgaagttgcacaaatcatggatgaatctcttgaa
gaaaataactcatcaatggtcttaaaatgtattgcaatatctgattcacatatatccatt
caaacctccaaaaattcatctgcaccttttcaatgcttttctgcttcatgggtttactcc
aaggtggttttattaggtgtttcttttcttgagtctgaacgtaggtacaatgatgcaatt
aatttgctgaaacgcctgctacttaactttcgtaatgatagaagaagagggtattggaca
ttgagactttccactgatttggagcatctgggtcgggtcaacgagagcctatccgttgct
gaaaccgggttggatgacccatgggttcgggccgggtcaaaaatatcattacaaagacgg
gtgctccggttaggaaaaccaccaagaagatggaaagttccaagcttttcagactccatc
aaacggaagattccagaggtccatgttgaaggcaggccattaaattgtaaaaccggaaca
aaaagccggttttatggagaagatggagaacaatgtggggtagaggagcttgctttacag
tattacgcaggagaagaaggtggttattggaaaggagttcattcagaaagtgggatttgg
ctaactgttttcgggattcttatgtgggatgccatctttgctgacgtggccaatgtcttt
ctcaccagatttcaaacatcacctttagatttggaaacggactatttttatgaatcaagg
aaaaacattatagaatctttactagtaaaaatccaacaaggaatgggtgaagagatgttg
ataacttcatgggaattacatttcgggacagcctgtcgttgcgttaactggaacagacac
tcgttgactgagcttcgagcggttgtgtcatgcattggtggcggttgtctggcgtccatc
tgtcgccacctggcgcaggattaccggagttggtctagtggcatgccggatttgttactc
tggcgattccattccgattatagcggtgaggctaagcttgttgaagttaaagggccgaga
gatcgggtttctgaacagcagcgcgcttggcttttgttttttatggattccggtttcaat
gctgaggtttgtagggtcaatcctccggttgccaataaagttttcgtatga
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