Lactuca sativa (garden lettuce): 111897206
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Entry
111897206 CDS
T05352
Name
(RefSeq) transcription factor GAMYB isoform X1
KO
K09422
transcription factor MYB, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111897206
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
111897206
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Chromo_2
Motif
Other DBs
NCBI-GeneID:
111897206
NCBI-ProteinID:
XP_023748926
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Position
5:complement(187421888..187425121)
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AA seq
461 aa
AA seq
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MVLLWFMEMSNMTSESEERISCKNSPSFDEGSTESERNMVEGTGFGSLKKGPWTSAEDAI
LMEYVSQNGEGNWNAVQKLSGLSRCGKSCRLRWTNHLRPDLKKGAFTPEEERLIIELHAK
MGNKWARMAVELPGRTDNEIKNFWNTRTKRKQRAGLPIYPHDISFQQLNDNSQNQNMLMF
PNGDSGIFPPTTNLHIPSIDYKDFILNHEFYQNQIPTESSLLDIAFPMPTPYPPKRFRPG
GGGGGGLGDVFSGLNGYEDEKIGQTLTPSSSSYLYNTCTGSHAFINGNNCSSFEPNLWAM
KNELPSLQYFHGAPPSSSSCSSFEIEWSESDSHSRRNSGLLEAVLHESETLKISKTKNDL
NNVDDQNLVSDCYGSPLTYSAASVFSEYTPISGTSMDEHLSVEATSVKQEAGESDDIWND
VSCLRPDSLLGLNWFSSDPITSLVSHHDDTSTTIHTGSQYL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgttgtggttcatggagatgagcaacatgacaagtgaaagtgaagagagaata
tcctgcaaaaattcaccaagttttgatgaaggtagcactgaaagtgaaagaaacatggta
gaaggaacaggatttgggtcactaaagaaaggtccgtggacatctgctgaagatgcaatc
ttaatggaatacgtgagccagaatggagaggggaattggaatgctgttcagaagctctca
gggctatctcgttgtggtaaaagctgtcgcttacgctggacaaatcatttaagacctgac
cttaaaaaaggcgcatttacccctgaagaagaacgcctcatcattgaacttcatgctaaa
atgggaaacaaatgggcacgtatggctgttgagttacccgggcgcacagataacgaaatc
aagaacttttggaacactaggaccaaaagaaagcaacgtgccggattaccaatttaccct
cacgacatctctttccaacaactcaacgataactcccagaatcaaaacatgctcatgttc
cccaatggcgattccggaattttcccaccaaccactaacctccacattccatccatcgat
tacaaagatttcatactaaatcatgagttttatcaaaatcaaattcccaccgaaagtagc
ttgcttgatatcgcattccctatgccaacaccatatccacccaagcgcttcaggcccggt
ggcggtggtggtggtggtcttggtgatgttttttctggcttgaatggatatgaagatgag
aagattggtcaaactttgaccccatcatcatcatcttacttatataatacatgcacaggt
agccatgcctttataaatggcaacaattgttcatcttttgagcctaatttatgggcaatg
aagaatgagctcccttcactccaatattttcatggtgcaccaccttcttcttcttcttgt
tcttcctttgaaattgagtggtcggaatctgattcccactcacgtaggaacagtggtctg
ttagaagctgtgctccatgaatcagaaaccttaaaaatctcgaaaaccaagaatgatctc
aacaatgttgatgatcagaatttggtttcggattgttatggttccccattgacttattca
gctgcatcagtgtttagtgaatatactccaatcagtggaacctcaatggatgaacatctt
tcagttgaggctacttcagttaagcaggaagcaggtgaatctgatgacatctggaatgac
gtcagctgtttgaggccagattctcttcttggcttaaactggttttctagtgatcccata
acttcacttgtttcccatcacgatgacacctctacaacaatccacacagggtctcaatat
ctttaa
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