Lactuca sativa (garden lettuce): 111897327
Help
Entry
111897327 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111897327
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111897327
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111897327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
YqiJ_OB
Motif
Other DBs
NCBI-GeneID:
111897327
NCBI-ProteinID:
XP_023749052
LinkDB
All DBs
Position
6:complement(34007368..34010277)
Genome browser
AA seq
477 aa
AA seq
DB search
MESSVYDKNRDPSQHEILEVFKREIGFNPPRNFSRRISASEALVKRIDLAGKLNGHEGCV
NTIEFNHCGDHLVSGSDDRRVMFWNVATKSLVLSYASGHVDNIFQARIMPFTDDRTIVTS
AADGQVRLGQIAENGHVQTKKLGKHHGRVHKLAVEPGSPHIFYSCGEDGLVQHFDLRSNS
STKLFCCTPFTELNHSHSSSNTIRLNSIIIDPRNPNFFSIGGSDKYARLYDIRNFDQPVN
TFCPKHLTETHDVHITGMSYSNTSELLISYNDELIYLFQKNNGGLGPNPLNVMSSDDLED
PQVYCGHRNSLTVKGVSFFGPNCEYVMSGSDCGHIFIWKKKGGRLVRVMEGDRRIVNQVE
PHPSIPVLASSGLEKNIKLWVPVSDDILPLPHDLQEIVESNRRGREDHSRVTLTPDVIMH
VLRLHRRQALAYIERRRNRDELGSDDEEEDEGDGYVMGFSDADGSLDDGNSTECNIV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggagagcagcgtatatgataagaatagggatccttcgcaacatgagattctggaggtt
tttaagagagaaatcggtttcaatcctcccagaaacttctctcgccgaatctctgcttcc
gaggctcttgtaaagagaattgatcttgctggtaaactaaatgggcatgaaggttgtgta
aacacaatagagttcaaccattgtggtgatcaccttgtgtcaggttctgatgacagacga
gttatgttctggaatgtagcaactaaatccttagtcctttcatatgcttctggtcatgta
gacaacatatttcaagctagaatcatgcctttcactgatgacagaaccatagttacttct
gctgctgatggccaggtaagacttggtcaaatagcagagaatggacatgtccaaacaaaa
aaattaggtaaacaccatggacgtgttcacaagcttgcagttgagcctggaagtccccac
atattttacagctgtggtgaagatggattagttcaacattttgatttgcgaagtaattct
tccacaaagcttttctgttgcaccccattcacagaactcaaccacagccactcatcctca
aacaccataagattaaactccatcataatcgacccaagaaaccctaattttttctccatt
ggaggttcagataaatacgcacgtctatatgacatcagaaactttgaccaaccagtcaac
acattttgcccaaaacatctgacagaaacacacgatgtccacatcactggaatgtcatac
tccaacacaagtgagcttcttatctcctacaatgatgaactcatttatctttttcaaaaa
aacaacgggggtttaggtccaaatcccttgaatgtgatgagttcggatgatttggaagat
ccacaagtgtattgtggacataggaattcattgacagttaaaggggttagtttttttggg
ccgaattgtgagtatgttatgagtggatcggattgtgggcatatttttatttggaagaaa
aaaggtggtaggcttgttagggtgatggaaggtgataggcgtatagtgaatcaagttgag
cctcatcctagtatccctgttcttgcttcatctggtttggaaaagaatataaagctttgg
gttcctgtttctgatgacattcttccccttcctcatgatttacaagagattgtggagtca
aacaggcgagggagggaagatcattcacgggttacactgacgcccgatgtgataatgcat
gttttgcggcttcatagaaggcaagcattggcttacatagaaagaagacgtaatagagat
gaacttggaagtgatgatgaggaagaagatgaaggtgatggttatgtcatgggattttct
gatgctgatggctccttagatgatggaaattcaaccgagtgtaatattgtttga
DBGET
integrated database retrieval system
