Lactuca sativa (garden lettuce): 111897417
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Entry
111897417 CDS
T05352
Name
(RefSeq) RINT1-like protein MAG2
KO
K20474
RAD50-interacting protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111897417
Membrane trafficking [BR:
lsv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
111897417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
AP5B1_middle
Motif
Other DBs
NCBI-GeneID:
111897417
NCBI-ProteinID:
XP_023749150
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All DBs
Position
5:43496669..43500038
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AA seq
763 aa
AA seq
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MIEPLPLVSSLSPAVLSFLDTQLHTTVDLQEASRLVSELQNDCHVLDQSLTDLNQNLGTY
LLAYSTHSDQVGLLFKDINIKLTSFQPSISDGEKGEKREKSETFLGKELPALAREVARVE
AVRVYAETALKLDTLVGDIEDAVSSSVNKNLRKQTSPHNSEEARFIAINALKLAEDVLTK
VSRTRPQWSRLVSAVDHRVDRALAILRPQAIADYRSLLTSLHWPPPLSTLNPSNLEPKKS
PESTNPLFTMKGDLKTQYCDSFLALCKLQELQTQRKIRQLQGHNGNLEITHQPLWAIEEL
VNPISIASQRHFSKWGDKPELIFALVHKITRDYVDSMDELLQPLVDKANLSGYSCREEWI
SAMVTSLSTYMAKEIFPIYMENITENRISWLHFIDLMISFDKKIKALVAQSGIMLEEDVN
MQNISSLSVFCDRPDWLDLWAEIEFSDAIEKLTPVLEDEKKWSTEVEESVNILGSEGYKS
PAISSAFLTRLSSIIERCRSLPAVTMRARFIRLAGAPIVHRLLEFLFLKCQEAEGLTALT
DDDALIKVTKCINGSRYFESVLKEWCEEVFFLEMGSDGGVFDDEICKLEEFRIEWVEKLS
KVVFRGFDACSREYIKNKKQWMEKSEEGWGVSKSFIVALDYLQGKMSILEMNLNKMDFVG
VWRQVASAIDLFVFNGVFMGYVKFSDGGVERLGNDLMVLYGVFKNWCLRPEGFFGKLSEG
LKLLKMEDRLLHGSFEGGERWLKLNGIRHLTLTEVERVVKSRI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaacctctccctttagtctcctctctttctcctgcggttctctctttccttgac
acccaactacacactactgttgatcttcaagaagcttctagactagtttctgagttgcag
aatgattgtcatgtcttggatcagagcctcacagatttgaaccaaaacctcggtacctat
ttgcttgcttactctacacactcagatcaagtgggtctcctctttaaagacataaacatc
aaattaaccagtttccaaccttctatctcagatggagagaaaggggagaaaagggaaaag
tcagaaacttttttggggaaagagttgccagctcttgctcgtgaagtggctagggttgaa
gcagttcgagtctatgctgaaacagcattaaaacttgatacattagttggggacattgaa
gatgctgtctcttccagtgtaaacaaaaatttaagaaagcaaacatctccccacaattcg
gaggaagcgcgatttattgccattaatgccctcaaactagcagaagatgttctaacaaaa
gtatcaagaacacgccctcaatggtcacgccttgtttcagctgttgaccacagagttgac
cgagcattagccattttaagacctcaagcaattgcagactatcgttcccttctcacctct
cttcattggccaccacctctctccactttaaatccttccaatttagaaccaaaaaaatca
cccgaatccacaaatccccttttcacaatgaaaggcgacctcaaaacccaatattgtgac
agttttcttgcactatgtaaactacaagagctacaaacacaaagaaaaattcgacaactt
caagggcataatggtaatcttgaaatcactcatcagccactttgggccattgaagagctt
gtgaaccctatttcaatcgcatcacaacgccatttttcaaaatggggtgacaaacccgag
cttatttttgctttagttcataaaataactcgggattatgtcgattcaatggatgaatta
ttgcagcctttagttgataaagcgaatctttcaggttattcttgtagggaagagtggatt
tcagccatggtgacatcattatcaacctacatggcaaaggagattttcccaatatatatg
gaaaacatcactgaaaaccgaatatcttggcttcattttatcgatttaatgatttctttt
gataaaaaaatcaaagctcttgtagcacaatcaggaatcatgttggaggaagatgtgaac
atgcaaaacatttcttctttatctgtgttttgtgatcgacctgattggcttgatttatgg
gctgaaatcgagttcagtgatgccattgagaaactgacacctgtacttgaagacgagaaa
aaatggtcaacagaagttgaagaatcagtcaacattttaggttcagaaggttacaaatca
cccgcaatttcaagtgcctttttaacacggttatcgtctataatcgaacggtgtagatca
ctgccagctgtcacaatgagagcaaggtttattaggttagcaggtgcgccaattgtacac
aggttattggagtttttatttctcaaatgtcaagaagcagaagggttgaccgctttgacc
gatgatgatgctctgattaaagtgacaaaatgtataaacgggtcccgttattttgaatct
gttttaaaagagtggtgtgaagaagtttttttccttgaaatgggatcagatggtggtgta
tttgatgatgaaatatgtaaattagaggaatttagaatcgaatgggttgagaagttatca
aaggttgtttttcggggttttgatgcgtgttcacgtgaatatataaaaaacaaaaaacaa
tggatggaaaaaagtgaagaaggttggggggtttcgaaatcttttattgttgcacttgat
tatcttcagggtaaaatgtcgatattggaaatgaatttaaataagatggattttgttgga
gtgtggagacaggttgcaagtgcgatagatttgtttgtttttaatggtgtttttatgggt
tatgtgaagttttctgatggtggtgtggagagacttgggaatgatttgatggttttgtat
ggggtttttaaaaattggtgtttgaggcctgaagggttttttgggaaattgagtgagggg
ttgaagttgttgaaaatggaggatagattgcttcatgggagttttgaaggaggagaaaga
tggctgaagctgaatgggataagacatttgactttgactgaggtcgaaagagtcgtgaag
agtagaatataa
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