Lactuca sativa (garden lettuce): 111897452
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Entry
111897452 CDS
T05352
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111897452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111897452
03012 Translation factors [BR:
lsv03012
]
111897452
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111897452
Translation factors [BR:
lsv03012
]
Eukaryotic type
Release factors
111897452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
eRF1_3
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
111897452
NCBI-ProteinID:
XP_023749183
LinkDB
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Position
2:62186624..62191041
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AA seq
455 aa
AA seq
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MSTDENIEIWKMKKLIKALEDARGNGSSMISLIIPPRDQISRVTKMLADEFGTASNIKSR
VNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTNDGKEKKVTIDFEPFRPINVSLY
LCDNKFHTEALDQMLESDDTFGFIVMDGKGTLFGIVRGDSREVLHKFPVDLPKKHGRGGQ
SALRFDRIRMEKRHNYLRKTAELATKFYINPATNQPNVSGLILAGCADFKNDLGQSDMFD
PRLQAKILNVVDVSYGGEDGFNQSIKLSYDILANVKFIQEKHLIGKYFEEIKQDGGKYVV
GAYDTLEALDMGAVETLIVWENLEINRYVLKNGVSGEIIVKHLNKEQETDESNFRDLVNN
VELEVEEKMSLLEWFANEYKRFGCKLEFVTNRTHEGFNFCKGLGGIGGILRYQIDIHPFD
ELSDYDGENNDIEISDDEESYETENHGEGVNYDAE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgatgagaatatcgagatatggaagatgaagaagcttataaaggcacttgaa
gatgctagaggcaacggaagcagcatgatttctctgataatccctccacgtgatcaaatt
tcacgagtcaccaagatgcttgctgatgaatttggaactgcttccaacattaagagcagg
gtgaatcgtcagtctgttttaggtgctataacatctgcccaacagaggctcaagctctac
aacaaggtacctccaaatggacttgttctatacacaggaacaatactaacaaacgatgga
aaagagaaaaaggttacaatcgactttgaacctttcagacctataaacgtatctctttac
ctctgtgataacaaattccacacagaagctcttgatcaaatgttggaatctgatgacacg
tttggtttcattgttatggatggaaaaggcactctttttgggatagtaaggggcgatagt
agggaggttctacacaaatttcctgttgatttgccaaagaaacatggaagaggagggcaa
tcagctttgagatttgatcgtattcgtatggagaaacgtcacaactatttaaggaaaaca
gcagagcttgcaacaaagttttatatcaatcctgctactaatcagcctaatgtttctgga
cttatacttgctggatgtgctgatttcaagaatgacctcggtcaatctgatatgtttgac
ccgcgtcttcaggcgaaaatcttgaatgtggttgatgtctcttatggaggtgaagatggg
ttcaatcagtctattaagttgtcttatgatattcttgcaaatgtcaagttcatacaggag
aagcatttaatcgggaagtattttgaggagatcaaacaggatggagggaagtatgtcgtg
ggtgcttatgacactttggaagctttagacatgggtgctgtggagacactcattgtttgg
gaaaatctggagattaatcgatatgttcttaaaaacggtgtttcgggtgaaattattgtt
aagcatttaaacaaggaacaggagactgatgaaagtaattttcgggatttggtgaacaat
gttgaacttgaagtggaggaaaagatgtctcttcttgagtggtttgctaatgaatacaaa
agatttggatgcaagcttgagttcgtcacaaatagaactcatgagggatttaacttttgt
aaaggccttggtgggattggtggtattcttcgttaccagattgatattcacccatttgat
gagttgtctgattacgatggagaaaataatgatattgaaatttctgatgatgaggaaagt
tatgaaactgaaaaccatggtgaaggggtgaattatgatgctgaatag
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