Lactuca sativa (garden lettuce): 111897507
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Entry
111897507 CDS
T05352
Name
(RefSeq) protein transport protein Sec24-like At3g07100 isoform X1
KO
K14007
protein transport protein SEC24
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111897507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111897507
Membrane trafficking [BR:
lsv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111897507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
HVO_2753_ZBP
VWA
Sen15
Motif
Other DBs
NCBI-GeneID:
111897507
NCBI-ProteinID:
XP_023749229
LinkDB
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Position
5:363084588..363094010
Genome browser
AA seq
1101 aa
AA seq
DB search
MGTENPNRVNTYPGPIPTPFAAPRSNMPISSSSSHPVVGSEASAFRPTSVPATLTTPFSS
PGPTVGSGTPGFRPMQPGRPTPSYGPPTTGPTQRFPTPQFPSAAQPSMPPTSGVGQPIFP
PTMRPPPPGHVPPMSTSLNRQPPPAPMGSPPQSLYSVSSRPNMQQPTPPTGPPSSLPGYI
QSNTVTSPPPPPPPGSHQGGYTPQPTASSSFPSHQGVYTPQPTASSPFSSNQGGYTPQPA
TSSPFPSNHGGYTPQPATSSPFPSNQGGYTPQPTASSPFPSHQGGYAPQPTTAAPFSSHQ
GAYGQPPPGASQPGMYVGGSAPPTGAMAGGLVEDFSSLSLGSTPGSFDVGLDSKVLPRPL
DGDVEPTAFAGMYPMNCDSRFLRLTTSAIPNSQSLVSRWQLPLGAVVCPLAEAPEGEEVP
IVNFATTGIVRCRRCRTYVNPYVTFTDGGRKWRCNICALLNDVQNDYFAHLDATGKRVDL
DQHPELTKGSVEFVAPAEYMVRPPMPPLYFFLIDVSISAVKSGMLEVMAQTIKSCLDKLP
GSPRTQIGFITFDSTIHFYNMKSSLTQPQMMVVSDLEDIFVPLPDDLLVNLSDSRPVVEA
FLDSLPSMFQDNVNVESAFGPALKAAFMVMSQLGGKLLIFQSTLPSLGVGRLRLRGDDLR
VYGTDKEHALRIPEDPFYKQMAADFTKFQVAVNIYAFSDKYTDIASLGTLAKYTGGQVYY
YPSFHSAIHTEKLRHELARDLTRETAWEAVMRIRCGKGVRFTSYHGNFMLRSTDLLALPA
VDCDKAYAMQFALEETLLTTQIVYFQVALLYTASCGERRIRVHTAAASVVADLGEMYRQA
DTGAIVSLLGRLAIEKSLTYKLEDARNAIQLRIVKALKEYRKLHAVQHRVGNRMIYPESL
KYLSIYGLSLCKSTALRGGYADAQLDERCAAGFTMMALPVKKMLKLLYPSLLRVDEYLVK
APRVDGEFERICKRLPLVAESLDSRGIYIFDDGFRFVVWFGRMLSPDLARNLVDEDSSAS
DFSKSQVCLNERENELSRKLMGILKRLREGDASYYQLCHLVRQGEQPREGFFLLLNLVED
QVGGMNGYADWIIQIHRQVQQ
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggggactgaaaatccaaaccgtgtgaatacttatccagggccaattcctactcctttt
gcagctcctcgaagcaacatgcccatttcttcttcttcttctcatcctgtggttggatca
gaggcctctgctttcaggccaacatcagtccctgcaacattaactactccattttcttct
cctgggcccacggttggatccgggactcctggttttagacccatgcaaccaggtaggcct
actccttcatatggcccaccaaccacaggacctacacaacgtttcccaactccacagttc
ccctcagcagctcaaccatccatgccaccaacttccggtgtggggcagcccatattccct
ccaacaatgagacctccacctcccggccatgttccaccaatgtcaacctccctaaatcgt
cagccaccaccagcaccaatgggatcaccaccccaaagcttgtacagtgtttcttctagg
ccaaacatgcagcaacctacacccccaacaggaccaccatcttctttacctggctatata
cagagtaacacagtaacatcaccaccaccaccgccaccaccaggttctcatcaaggcggt
tatacccctcagccaactgcttcttcttcttttccttctcatcaaggagtttatacccct
cagccaaccgcatcttctcctttttcttctaatcaaggaggttatacccctcagccagct
acatcatctccttttccttctaatcatggaggttatacccctcagccagctacatcttct
ccttttccttctaatcaaggaggttatacccctcagccaaccgcatcttctccttttcct
tctcatcaaggaggttatgcccctcagccaaccacagctgctcctttttcttctcatcaa
ggtgcttatggacaacctccaccaggagcatctcaaccaggaatgtatgtaggaggctcc
gcacctccaacgggagctatggcgggtggtttggtagaagattttagctccctttctcta
ggatctacgcctggatcatttgatgttgggcttgatagtaaagtattgccaagaccactg
gatggtgatgtagaaccaactgcttttgctgggatgtatcccatgaattgtgattctaga
ttcctacgacttaccactagtgcaataccaaattcacagtctctggtttcaaggtggcag
ttgcctcttggtgcagttgtctgtcccctggcagaagctcctgagggtgaggaagttccc
atagttaattttgctacaacgggaattgtgcgttgtagaagatgtcgtacatatgtgaac
ccatatgtgacttttacggatggtggaagaaagtggagatgcaatatatgtgctttgctt
aatgatgtgcaaaatgattattttgctcatttggatgccactggaaaaagagttgatctg
gatcaacatcctgagcttacaaagggttctgtggaatttgttgctcctgctgagtacatg
gttcggcctccaatgccaccactgtactttttcttgatcgatgtatcgatatctgcagtt
aaaagtggaatgcttgaggtgatggcacaaactataaaatcttgtttggataagttgcca
ggcagccccagaacacagattgggttcattacttttgacagcaccattcatttttataat
atgaagtcatctttgacacagcctcaaatgatggtcgtctcagatttggaagatattttt
gttccattgccagatgatctccttgtcaacttatcagactctagacctgtggttgaggca
ttcctggatagcttgccttccatgtttcaggacaatgtcaatgttgaatctgcttttggg
ccagccctcaaagcagcttttatggttatgagccaacttggagggaaattgttaattttc
cagagcactcttccctcacttggtgttggtcgtttgaggttgcgtggagatgatcttcgt
gtttatggaacagataaagaacatgctttaagaataccagaagatccattttataaacag
atggcagccgatttcactaaattccaggttgcagtcaatatatatgcattcagtgacaag
tatactgatatagcttcactaggtactttggcaaaatacactggtgggcaggtatattat
tatccaagcttccattctgccattcatacagagaagctaagacatgagttggctagagat
cttactagagaaactgcatgggaagctgtgatgcgtatcagatgtgggaaaggagtgcgt
ttcacttcttatcatggaaactttatgctaagatccacagatctattagcacttccagcc
gttgactgtgacaaagcttatgcaatgcaatttgctcttgaagagacattgctcacaact
cagattgtatatttccaagtggctttattatacactgcatcttgtggtgaaaggcgtatt
agagtacacaccgctgcagcatcagtggttgcagatttaggagaaatgtatcgccaggca
gatactggtgccattgtttccttacttggtagattagcaattgagaagtctttgacgtat
aaattggaagacgcacgtaacgcgatccaactaagaatcgtgaaagctctgaaagaatac
agaaaacttcacgctgtgcagcatcgtgtgggaaacaggatgatttacccagaatcatta
aaatatttatctatttacggattgtcactatgtaaatcaaccgcacttcgtggtgggtat
gctgatgcacagcttgatgaaagatgtgcagcaggttttaccatgatggctttacccgtt
aaaaagatgttaaaactcttatatcctagcctgttacgagtcgacgagtatcttgtgaag
gcacctagagttgatggtgaatttgagagaatttgtaaacggcttccactcgttgcagag
agtttggattcacgagggatttatatatttgatgacggttttcgttttgtggtgtggttc
gggcgcatgctttcgcctgatttagccaggaatctagtagacgaggattcatctgcttca
gacttctccaagagccaggtttgtctgaatgaacgtgagaatgaattgtcgagaaagctg
atggggatattaaagagactcagagaaggggacgcgtcttattatcaattatgtcatctt
gttagacaaggggaacagcctcgggaaggtttctttttgctgttgaatctggttgaggat
caggttggtggtatgaatggttatgctgattggataattcagatccatcgacaagtccag
caataa
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