Lactuca sativa (garden lettuce): 111897586
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Entry
111897586 CDS
T05352
Name
(RefSeq) (E)-beta-farnesene synthase
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
111897586
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
111897586
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GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
Motif
Other DBs
NCBI-GeneID:
111897586
NCBI-ProteinID:
XP_023749309
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Position
5:98516757..98520056
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AA seq
568 aa
AA seq
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MSSPVLCSYSSSDTDLNICKETVIRSTVNFHRSIWGDRFLTYNEREDLAWEEQQAKELRE
EVRKQLVVNTASNEQMQHVKLIQLIDVVQRLGVAYHFEEEIEETLNHMFVTYGDHWIDDS
NLQSTSVWFRLLRQQGFNVSSGIFKKYMDSKGNFMESVRKDVQGMLSLYEAAYMRVEGEE
VLDEALSFTTFQLENIANDHLCKDASLKIQIEEALEQPLRKRLPRLEALRYIPIYQKEAS
HNEALLKFSMLDFNLLQSLHKKELSQISKWWKNLDLQNKLPYVRDRLVEGYFWILAVYFE
PQYSDARIFLMKTCNLVIILDDTYDNYGTYEELEIFTQAVQRWSASCIDTLPEYMKIIYQ
ELLDVYKEAEEVLEPKGKAYHSYYTKEMVKEYTRNLLIEAKWAKEGYIPTVEEHMSVTMV
TCAYGMIIAKCYVHGDDLVTEDTFKWVSTYPPLVKASCLILRLMDDIATHEEEQERNHVA
SSIECYMKQYGVSEEQTREIFSIQVEDSWKVINQESLRPTDIPRPLLMPPINLARVCDVL
YKHGDDYNHAGKEMIHIIESLLANSMSV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccctgttctttgttcttactcttcttcagacaccgatcttaacatctgtaaa
gaaaccgttatacgcagcacagtgaacttccatcgtagcatttggggagatcggtttctt
acttacaatgagagagaggatctagcttgggaggagcaacaagctaaagaactgagagag
gaagtgagaaaacaactagtagtcaatactgcttcaaacgaacaaatgcaacatgtgaag
ctgatacaactcattgatgtcgtacaacgactcggtgtagcatatcattttgaggaggaa
atcgaggaaaccttaaaccatatgtttgttacatatggagatcactggattgatgatagc
aacctccaaagcacttccgtttggttcagactcctacgtcaacaaggctttaatgtttca
agtggaatattcaagaagtatatggacagcaagggaaatttcatggaatctgtaagaaaa
gatgttcaaggcatgctttctttgtatgaagctgcatacatgagggtggaaggcgaagaa
gttttagatgaagccctcagttttacgacttttcaacttgaaaacatagctaatgatcat
ctgtgtaaggacgcatctcttaagattcagatagaagaagcactagaacaacctcttcgc
aaaaggttaccaaggctagaggcgttgcgttacatacccatctaccagaaagaagcttcg
cataatgaagccttactaaagttttccatgttggatttcaatttacttcaatccttgcac
aaaaaggagctcagccagatcagcaaatggtggaagaatttggatttacaaaacaagcta
ccttatgttcgggacagattggtagaaggctacttttggatattggcagtctattttgag
cctcaatattctgatgctaggatctttctaatgaaaacatgcaatcttgttatcatattg
gatgacacgtatgataactatggtacatacgaagagcttgagatctttacccaagctgtt
caaagatggtcggcaagctgcattgatacacttcctgagtacatgaaaatcatatatcaa
gaacttttggacgtttataaagaagctgaggaagtactagaacccaaagggaaagcatat
cacagttactatactaaagagatggtgaaagagtacactcgaaatctcctaatcgaagcc
aaatgggcaaaagaaggctacattcctaccgtagaagaacacatgtcagttacaatggta
acatgtgcttacggcatgatcatagcaaaatgttatgtgcatggtgatgatttggtcact
gaggatacattcaaatgggtgtccacctatcctcctctcgtgaaagcttcatgtttgatt
ttaaggctcatggatgatattgctacccacgaggaggaacaagaaaggaaccacgtagct
tctagcattgaatgttacatgaagcaatatggtgtctcggaggaacaaacacgtgaaata
ttctcaatacaagtggaagattcgtggaaagttataaatcaagagtcactaaggccaact
gatataccgaggcctctgctcatgcctccaatcaacctagcaagagtttgtgatgttttg
tataaacatggtgacgattacaatcatgccggaaaggaaatgatccatattattgaatcg
cttctggcaaattctatgagtgtttag
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