Lactuca sativa (garden lettuce): 111897738
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Entry
111897738 CDS
T05352
Name
(RefSeq) protein CNGC15b
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111897738
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111897738
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111897738
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Cation_ATPase_C
IQ
Motif
Other DBs
NCBI-GeneID:
111897738
NCBI-ProteinID:
XP_042751705
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Position
6:64463060..64466766
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AA seq
695 aa
AA seq
DB search
MSYANSRSVRFQDEVELPKFQSINADDLFKVKYNIEAKQIPETRIPEKRIEKHTRPSLKS
KVLSRVFSEDYERVKKKILDPRGQSIRKWNKIFLVACLVSLFVDPLFFYLPSVRKNACID
IGFTLEVSLTIVRSVADVFYMIQIYMKFVTSYVAPSSRVFGRGELVIDSSKIAKRYIKGD
LWIDFVAALPLPQLLIWVIIPSLSGSAMANTKNVLRFFIILQYVPRLYLIFPLSSQIVEA
TGVVTETAWAGAAYNLMLYMLASHVVGACWYLLAVERQEACWRSICVVEDPNCKDEFFDC
ERINEASRRSWFQTSNLTNQCVPTSEFYPFGIYGDALESEVTSALFFNKYFYCLWFGLKN
LSSLGQNLSTSTYIGEIMFAIVIATVGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTE
QWMHHRQLPPELRQSVRRYDQYKWVATRGVDEESLLKGLPLDLRRDIKRHLCYDLVRRVP
LFDQMDERMLDAICERLQPSLCTQGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFYN
SCQIGPGDFCGEELLTWALDPRPSVVLPSSTRTVKAISEVEAFALIAEDLKFVASQFRRL
HSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKRRKSVRELQARESFKSVDYESGASSPVH
GGGSRRPGGLKPGGGGGSLQKPTEPDFSVEERNDY
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgctaattcaagatctgtaagatttcaagatgaagttgaactaccaaagttc
caatcaatcaacgccgacgacttatttaaagtcaaatacaacatagaagcaaaacaaata
ccagaaacaagaattcccgaaaaaagaatcgaaaaacacacacgaccctccttaaaatcc
aaagttctttcaagagttttctccgaagattacgaaagagtcaagaaaaaaatcttggat
cctcgaggtcaatccatacgaaaatggaacaagattttcttagtcgcatgtttagtttct
ttattcgtagaccctttgttcttttacttaccatcagtcagaaaaaacgcttgcatcgac
atcggattcaccctcgaagtctctctcacaatcgtaagatcagtagccgatgttttttac
atgattcagatatacatgaagttcgtaacttcttacgtggcaccttcttctcgtgttttt
ggaagaggtgagcttgttatagattcttccaaaatagcaaaaagatacataaagggtgat
ctttggatcgattttgtagctgcccttccccttcctcagctgttaatctgggtaataata
ccgagcttaagtggttcagccatggcgaacacaaagaacgttcttcgtttctttatcatc
cttcaatacgttccaagactttatcttatcttccctctctcctcacaaatagtcgaagcg
acaggtgtcgttacagaaacagcatgggctggagcagcgtataacttgatgttatacatg
ttggcaagccacgttgtaggagcttgttggtatcttttagcagttgaaaggcaagaagcg
tgttggagaagcatatgtgttgttgaagatccgaattgtaaagacgaatttttcgactgt
gaaagaattaacgaagcttctagacgttcatggttccaaacaagcaatctgacaaatcaa
tgtgtccccactagcgagttttatccgtttggtatctatggggatgcactcgagtcggaa
gtgacgtcagccttgttcttcaacaagtacttctattgtctttggttcggcttaaagaat
ctcagttctttgggtcaaaacttgtcaacgagcacttacattggtgaaataatgtttgcg
attgtgatagcgactgtgggtttggttcttttcgcgttgttaataggaaatatgcagact
tatcttcaatcgacaacggttcgattagaagaatggcggatcaagagaaccgatacggaa
caatggatgcaccaccgccaactgccaccggagctccgccagtctgtccggagatatgac
cagtataaatgggtggcaactcgaggggtggatgaagaatctcttcttaaaggacttccg
ttagatctccgacgagatataaaacgtcatctttgttacgatctagttcgccgagttccg
ttgtttgatcaaatggatgaaaggatgctagatgcgatatgtgagaggctacaaccgtca
ttgtgtactcaaggaacatgtctagtgcgagaaggtgatccggtgaacgaaatgttattt
ataattcgaggaaacctagattcctacactacaaacggtggtcgaactggcttttacaat
tcatgccagatcggtccaggtgatttttgtggggaggagctgctgacgtgggccttggac
ccacgtccgagtgtggtcctcccctcgtccacccggacagttaaggcaatatctgaagtc
gaagcttttgcgctcatagcagaggatttgaaatttgtggcgtcacagtttcgaagattg
catagtaagcaattaaggcataagtttaggttttatagccaccagtggcggacatgggcg
gcttgttttgttcaggcggcgtggcggcgatataagaggagaaagagtgttagggaactt
caggctcgtgagagctttaagagtgttgattatgagtcgggagctagctcaccagtgcat
ggtggtgggagtagaaggcccggagggttgaaacctggcggcggcggtggctcgttgcag
aaaccgacagaacctgatttttctgtagaggagaggaatgattattga
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