Lactuca sativa (garden lettuce): 111897809
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Entry
111897809 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111897809 isoform X1
KO
K23288
syndetin
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111897809
Membrane trafficking [BR:
lsv04131
]
Protein recycling
Others
EARP complex
111897809
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
111897809
NCBI-ProteinID:
XP_052620596
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Position
6:60336505..60342948
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AA seq
1117 aa
AA seq
DB search
MQPSNFHASPLALIPIAFNHANLNPEGFELSRFFFLGSLLFSQGGAGDCGGGMDLSKVGE
KVLSSVRSARSIGFLPSTSDRPEIPPRAATAATLARALASIPPHHRQSLSSSSEELSSIY
GSRLPRGPVVEELEEEFYEEMFDPVRHTLEKLPPEENELTYFEAKAALRLLQLDKVTESL
SRQVMDHHEVMVKGMHLVKELEKDMKVANIICMNGRRHLTSSRNEVSRDLIVHTNSRRKQ
ALLDILPVLAELRHAQDMQVALETHVNEGNFFKAFQVLPEYLQLLDGFSELLVIQEMSRG
VEVWLGKALQKLDSLLLGVCRDFKETSFVTVVDAYALIGDVSGLAEKIQSFFMQEVISET
HGVLKNIVLEDLNTADIHNTRFTYSDLCTRVPESKFRECLLATLAVPFQVMCSYHAIMNF
SSNSKVPLGHLSPTMHKQHERTNSFKNLQRADSIPKEDNDSLTLSMSNSVSEPTDRNGIT
NSMESRDDGSGASSSGSSWFQLRSDATTFVSQTLLRGRRNLWQLTTSRLSVLLSSDAVGS
TSIHQFLKNYEDLNTFILAGEAFCGAEAIEFRHRVKAICESYYMCFHRQNIYALKMVLEK
ESWFIIPPETIQTVSFAGLVGDGAALIIQTASTNTSSSSQKPPDLAKINTKQSGFSHWIN
TGDPFSPKIASKKFDDSLSVFPDSPKGNFSEGCYRNSLSVDNSDVNHSNGHGDLEDENED
LHADFIDEDSQLPSRISKPNRSRNQSSPWSNEEMEAHTGSSICVLRVMDKYARLMQRLDI
VNAEFFKGICQHFGIFFHFVFLSFGQVNTNPSGNKGLHDTLNLRLKTALSRIRRDCDQWI
KSPPHSFSTSSSTHLNMPLSHSDNSHNGMSSNLNHITNTSFGLKERCAGADTISLVARVL
HKSKAHFQSILQQNNAVIVEDFYVHLVGSVPDLIEQIHRTTARLLLHISGYADRIANAKW
EVKELGMEHNGYVDLLLGEFKHYKTRLAHGGIHKEVQDTLIGYGLENLSETVVEGLSKVK
RCTDEGRALMSLDFQVLITGLQHFLTINVKPKLQRVETFIKAFYLPETEYVHWARAHPEY
TKSQMAGLINLVATMKGWKRKTKSEILEKIEAGSSGL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaagtaatttccacgcatcaccattggcgttgattccaattgctttcaatcat
gccaatttgaatcctgaaggtttcgagctttctaggtttttcttcttgggttcgcttcta
ttctctcaaggaggagccggtgattgcggtggaggtatggatttatcaaaggttggtgag
aaggttctcagttcagtccgctccgctagatccatcggcttcctcccttccacgtccgat
cgccccgagattccacctcgggctgcaactgcagcaactttagcccgtgcacttgcttca
atccctccccatcataggcaaagtctctcttcaagttctgaagaactgagttcaatatat
ggaagcaggcttcctcgtggtccagttgtggaggagcttgaagaagaattttatgaagag
atgtttgatcctgttcgccacactttagagaagcttccaccagaagaaaatgagctcaca
tattttgaagctaaggctgctcttaggttattacagctggataaagtaacagaaagtctg
tcacgccaagtgatggatcaccatgaagtaatggtgaaaggaatgcatttggtaaaggag
ttggagaaagacatgaaggttgcaaacatcatttgcatgaatggaagaagacacttaact
tcttcaagaaacgaagtatcaagggatcttattgttcacacaaattctagaaggaaacaa
gctcttttggacatactcccagttttagcagagcttcgtcatgcacaagacatgcaagta
gcacttgaaacccatgtcaatgaagggaacttctttaaggcattccaagtcttgcctgag
tatcttcaacttcttgatggtttctcagagcttttggtcatacaagaaatgagtcgtggt
gttgaggtatggttgggtaaagctttacagaaattggattcacttttgttgggagtatgc
agagacttcaaagaaacaagctttgtaactgtggttgatgcttatgcattaattggtgat
gtttctggtcttgctgaaaagatacaaagcttctttatgcaggaagttatatctgaaact
catggagtcctgaaaaatatagtgctagaggatttaaacactgctgacattcataacact
aggtttacatatagtgatctatgcactcgggtacctgaatctaagtttagggagtgtttg
ttagcaacactagctgttccctttcaagtgatgtgctcatatcatgcaatcatgaatttc
agttcaaatagtaaggttccattggggcatttatcacctactatgcacaaacaacacgaa
cgcacaaattctttcaagaatctccaacgtgctgattctattcccaaggaagacaatgat
tctttaactctctcaatgtccaattccgtttcagaacctacagaccggaatggaatcacc
aattccatggaatcaagggacgatggaagtggagcttcaagcagtggatcttcatggttt
cagcttcgtagtgatgccactacatttgtttcacaaacattactaagaggtcgaaggaat
ctttggcaacttacaacaagtcgtttgtcagttcttctttcttctgatgcagtggggtcc
actagcattcatcagtttttaaaaaattatgaagatctcaataccttcattttagctggt
gaagctttctgtggagctgaagctattgaatttaggcacagagtgaaagctatttgtgaa
agctactacatgtgttttcatcgccaaaatatatatgctctaaaaatggtattggaaaag
gagagttggtttatcatcccaccagagacaatccaaacagttagttttgcagggcttgtt
ggtgatggagctgcattgattattcaaactgcttctactaatacttcatcatcttcccaa
aaaccaccagatttggcaaaaatcaacactaaacagagtggattttctcattggattaat
actggagatccattttctccaaaaattgcttccaagaagtttgatgattctttatcagta
tttccagactcacccaagggaaatttcagtgagggatgttataggaacagtttatctgtt
gataacagtgatgtgaatcatagcaatggtcatggtgatcttgaagatgaaaatgaagat
cttcatgcagattttattgatgaagatagtcaacttccaagtaggatttcaaagccgaat
cgttcaagaaatcagtcttcaccttggagtaatgaagagatggaagcacacacaggatct
tcaatatgtgtcttgagggtgatggataaatatgcaaggctaatgcaaagattagatata
gtcaatgctgagttttttaagggaatatgccaacattttgggatattttttcatttcgtt
tttctaagctttggtcaagtaaacaccaatcccagtggtaataaaggattacacgacact
cttaatcttcggttgaaaacagccctatcaagaatacgacgtgactgcgatcagtggata
aaatctccacctcattcattctcaacctcttcatctacacatttaaacatgccattatcc
cattcagacaactcacacaatggcatgtcttcaaatcttaatcatataaccaacacctct
tttggcctcaaggaaagatgtgcaggggctgacactatatctcttgtggctcgagtattg
cataaatccaaggctcattttcaatcaattcttcagcagaataatgcagtgattgttgaa
gacttctatgtgcatttggttggttcagtgccagatcttatagagcaaattcatagaaca
actgcaagattacttcttcacattagtggatatgctgatcgaattgctaatgctaaatgg
gaagtgaaagaacttggaatggaacacaacgggtatgttgatttgttgttgggagaattt
aagcactacaagacaaggctcgctcatggaggcattcataaggaggtgcaagatacatta
ataggatatggacttgaaaatctttctgaaacagtcgttgaagggctatcaaaggtgaag
aggtgtactgatgagggtcgagctctcatgtcattggattttcaggttttgatcactggt
ctacagcattttctcacgattaatgttaagccgaaattacaaagagttgaaacttttatt
aaggcattttatctcccagaaaccgaatatgtgcattgggctcgtgctcatccagaatac
acgaaaagccaaatggcagggctaataaaccttgtggccaccatgaaaggttggaaaagg
aagaccaaatcagagattctagaaaaaattgaggcaggatcatcaggtttatag
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integrated database retrieval system
