Lactuca sativa (garden lettuce): 111897916
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Entry
111897916 CDS
T05352
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
lsv04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111897916
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111897916
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111897916
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111897916
03036 Chromosome and associated proteins [BR:
lsv03036
]
111897916
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111897916
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111897916
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111897916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
111897916
NCBI-ProteinID:
XP_023749637
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Position
5:complement(240119499..240122206)
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AA seq
534 aa
AA seq
DB search
MSIFVPESPGLLLAANSTIPTMLKQILAKLPRKSTKSNPTYSDGNNSTTTTDVNNNGSFT
NTCNVISSRLNVVKKMSSSIFPTSGNNNDMIQPHLPFKDVQNSEKLKLLISKLNLCSKIY
DFNDQDKDITSKDQKRQILIEILDFLVSESIKLSEPAMSAICRMCGANLFREFPPKPNGC
SPRGESEDDDLWFDPAWTHLQLVYEILLRFVSFSSLDPKTAKLYIDHSFLLKLLNLFDSE
DPRERECLKSVLHRIYGKFMVHRPFIRMGVSNIIYKFVFETEKHNGIAELLEIFGSVISG
FALPLKKEHKIFLLKALIPLHKPKSIGVYHHQLTYCVVQFIEKEPKLTSVVINGLLKYWP
VTNSQKQLMFLSELEELLELIRTDEFEKIMVPLFRRISCCLDSYHFQVAERAHFLWNNEH
IHHLIMCNRQVIMPIVFSSLQRNSNNHWNRTVLNLTQNVMKMFHEVDEPLVISCQGKFEE
DKSATTAVAERRRLTWEHLEEVAAGGGGGGGFRLPVVGSVSGLEKSGATCVVSC
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtccatttttgtcccagaaagcccaggtttattattggctgcgaattcaacaatcccg
actatgctcaagcaaatcctcgcaaaactccctcggaaatcaacgaaatcaaatccaaca
tactcagacggaaacaattccaccaccaccaccgatgtgaacaacaatggcagcttcacc
aacacctgtaacgttatttcaagccgattaaacgtcgtgaagaaaatgtcatcctcaatt
ttcccaacatccggtaacaacaacgacatgatccaacctcatctacctttcaaagacgtc
caaaactccgaaaaattaaaacttcttatcagcaaattaaatctttgctcaaagatctac
gatttcaacgaccaagataaagatatcacctcaaaagatcaaaaacgccagattttaatc
gaaatcctcgatttcctggtctccgaatccatcaaactcagcgaacccgccatgtcagca
atctgtagaatgtgtggagccaaccttttccgcgaattcccaccgaaacccaatggttgt
tcgccacgtggcgaatcggaagacgatgacctgtggttcgatcccgcttggacacattta
caactcgtatacgaaatcctccttcgattcgtttctttctcatctctcgatccgaaaact
gccaaactatacatcgatcattcgtttttattaaaactattaaatcttttcgattcggaa
gacccacgagaacgtgaatgtttaaaatcagttttacaccggatttatggcaaattcatg
gttcataggccatttattcgaatgggtgtgagcaatataatctacaaattcgtgtttgaa
actgaaaaacacaacggaattgctgaattacttgagatatttgggagtgtgattagtgga
tttgcattaccattgaagaaagaacataagatatttttgttaaaggctttgatcccttta
cataaaccgaaatcaatcggtgtttatcatcatcaattaacgtattgtgttgttcagttt
attgaaaaagaaccaaagcttacgagtgttgtgattaatgggttgttgaaatattggcct
gtgacaaatagtcaaaagcaattgatgttcttgagtgaattggaagagttgcttgagttg
attcgaacagatgaatttgagaagattatggttccattatttaggcggattagttgctgt
cttgatagctaccattttcaggtggcagaaagagcgcactttttatggaacaatgaacac
atacaccatcttataatgtgtaatcgacaagtgattatgccaattgtgttctcctcttta
caacgaaactccaacaaccattggaatcgaactgtgcttaacttaacacaaaatgtcatg
aaaatgtttcatgaagtggatgagccgttggtaatttcatgccaagggaagtttgaggag
gacaaatcagccaccacagcggtggctgagcggcggcgtttgacatgggagcaccttgag
gaggttgctgctggtggtggtggtggtggcggtttccggttgccggtggttgggagtgtt
tcgggtttggagaaaagtggtgccacgtgtgtagtgtcttgctag
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