Lactuca sativa (garden lettuce): 111897959
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Entry
111897959 CDS
T05352
Name
(RefSeq) syntaxin-32
KO
K08490
syntaxin 5
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111897959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111897959
Membrane trafficking [BR:
lsv04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
111897959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
DUF6444
DUF16
Motif
Other DBs
NCBI-GeneID:
111897959
NCBI-ProteinID:
XP_023749677
LinkDB
All DBs
Position
5:complement(241194009..241196303)
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AA seq
346 aa
AA seq
DB search
MNVKSSQGSSYRDRTQEFSSIAERLRKSLPSLNASASANNGGVGVSTKAEGPRSKVAIQT
EFNKRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTGVIKQDITALNAAVVD
LQFVCNSQNESQSISSDTTTHSTTVVDNLKNRLMGATKEFKEVLTMRTENLKVHENRRQL
FSASATKEPVNPFARQRPLANKSTTNSSNTPPPWVTNSSTSSPLFPRKQGDGESQPLLQQ
QQSQSQEMVPLQDNSYMQSRAEALHNVESTIHELGNIFTQLATMVSQQGELAIRIDENME
DTLANVEGAQGQLMRYLNGISSNRWLMIKIFFVLIVFLMIFLFFVA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaaatcctcgcaaggttcgtcgtatagagatcggacgcaggagttttctagc
atagctgagaggctaagaaagtcgttaccatctctaaatgcgtcggcgagtgcgaataac
gggggtgttggggtttctaccaaagctgagggaccgagatcaaaggttgcaatccagacg
gaattcaacaagagggcttccaaaattggatatggaattcatcagacgtcgcagaagcta
gcgaaacttgcaaaattggcaaaaaggacctctgtcttcgatgatccaacaatggaaatt
caagaattaacaggtgtgatcaagcaggacataactgcactgaatgcagctgtggtggat
ttgcaattcgtttgcaattcacaaaatgaaagccaaagcatttcaagtgacacaactacc
cattcaactactgttgttgataatctcaagaatcgtctcatgggtgccacaaaggagttc
aaggaagttcttacaatgaggacagagaatttgaaggttcatgaaaatagaagacaatta
ttttctgcaagtgctacaaaagagcctgtaaatccatttgcacgccaacgtccattggct
aacaaatcaacaactaattcctcaaatacccctcctccttgggttaccaactcctcaact
tcatctccactattccctaggaaacagggagatggagaatctcaaccgttgttacaacaa
caacaaagtcaaagtcaagaaatggttccattacaggataatagttacatgcagagtaga
gctgaggctcttcacaatgttgagtcaacaattcatgaattgggcaacatttttacacaa
ttggcaaccatggtttctcaacaaggggagcttgcaattaggattgatgaaaacatggag
gatacacttgcaaatgtagaaggggcacaagggcaattaatgaggtacttgaatggtata
tcatcaaacaggtggctaatgataaagatattcttcgtattaattgtatttcttatgatt
ttcctattttttgtagcctaa
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