KEGG   Lactuca sativa (garden lettuce): 111898018
Entry
111898018         CDS       T05352                                 
Name
(RefSeq) RING-H2 finger protein ATL11
  KO
K16282  E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27]
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111898018
Enzymes [BR:lsv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111898018
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111898018
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-RING_UBOX zf-rbx1 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-RING_16 zf-C3HC4_3 zf-Nse zf-RING-like zf-RING_Vps41 zf-C3HC4_4 PHD zf-RING_4 RINGv zf-RING_10 Prok-RING_4 Prok-RING_1 PHD_NSD zf_RING_Vps8_fungal
Other DBs
NCBI-GeneID: 111898018
NCBI-ProteinID: XP_023749732
LinkDB
Position
5:103202909..103203613
AA seq 169 aa
MGALSRFIAHVYTLFLVFFTVLFLELVILVRSVAGSIGYTTAADDHPMTTAQYLKLIDEK
NPASRYKTAGLERKECSVCLSVFDDGDEIRRLKCKHTFHKGCVDKWLEQDRATCPICRSL
VLPEAIVVKYSQRHQIPLHRRRREFYGGSDEELILLLTSLHGNYMRRFM
NT seq 510 nt   +upstreamnt  +downstreamnt
atgggagcactttctcgattcatagctcatgtctacacccttttcttagtattcttcact
gtcctcttcctggagctcgtaatcttggttcgctcagtcgccggaagtattggttacacg
acggcagccgacgaccacccaatgaccaccgcccagtacctcaaattgattgacgaaaaa
aacccagcgagtcggtacaaaaccgccggattagaacgtaaagagtgttcggtttgcctt
tctgtattcgacgacggcgatgaaatcaggagattgaaatgcaagcacacgtttcacaag
ggttgcgttgataagtggctggagcaagatagagccacatgtccgatttgccggagtttg
gtgttgccggaggcgatcgtggttaaatacagtcaacgacatcagattcctctgcatcgc
cgccgcagggagttttacggtggtagcgatgaggagctcatactcttgttgacttcttta
catggtaattatatgcgtagattcatgtaa

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