Lactuca sativa (garden lettuce): 111898018
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Entry
111898018 CDS
T05352
Name
(RefSeq) RING-H2 finger protein ATL11
KO
K16282
E3 ubiquitin-protein ligase RHA2 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111898018
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111898018
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111898018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_3
zf-Nse
zf-RING-like
zf-RING_Vps41
zf-C3HC4_4
PHD
zf-RING_4
RINGv
zf-RING_10
Prok-RING_4
Prok-RING_1
PHD_NSD
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
111898018
NCBI-ProteinID:
XP_023749732
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Position
5:103202909..103203613
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AA seq
169 aa
AA seq
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MGALSRFIAHVYTLFLVFFTVLFLELVILVRSVAGSIGYTTAADDHPMTTAQYLKLIDEK
NPASRYKTAGLERKECSVCLSVFDDGDEIRRLKCKHTFHKGCVDKWLEQDRATCPICRSL
VLPEAIVVKYSQRHQIPLHRRRREFYGGSDEELILLLTSLHGNYMRRFM
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgggagcactttctcgattcatagctcatgtctacacccttttcttagtattcttcact
gtcctcttcctggagctcgtaatcttggttcgctcagtcgccggaagtattggttacacg
acggcagccgacgaccacccaatgaccaccgcccagtacctcaaattgattgacgaaaaa
aacccagcgagtcggtacaaaaccgccggattagaacgtaaagagtgttcggtttgcctt
tctgtattcgacgacggcgatgaaatcaggagattgaaatgcaagcacacgtttcacaag
ggttgcgttgataagtggctggagcaagatagagccacatgtccgatttgccggagtttg
gtgttgccggaggcgatcgtggttaaatacagtcaacgacatcagattcctctgcatcgc
cgccgcagggagttttacggtggtagcgatgaggagctcatactcttgttgacttcttta
catggtaattatatgcgtagattcatgtaa
DBGET
integrated database retrieval system