Lactuca sativa (garden lettuce): 111898122
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Entry
111898122 CDS
T05352
Name
(RefSeq) ABC transporter B family member 6
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111898122
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111898122
04147 Exosome [BR:
lsv04147
]
111898122
04090 CD molecules [BR:
lsv04090
]
111898122
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111898122
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111898122
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111898122
CD molecules [BR:
lsv04090
]
Proteins
111898122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_15
AAA_29
Zeta_toxin
AAA_22
AAA_23
RsgA_GTPase
AAA_16
ABC_ATPase
HupE_UreJ
Motif
Other DBs
NCBI-GeneID:
111898122
NCBI-ProteinID:
XP_023749818
LinkDB
All DBs
Position
8:complement(23560214..23566280)
Genome browser
AA seq
1386 aa
AA seq
DB search
MMVSRGLFGWSPPRQQPLTPVSEVSECPSPYVDTSNDAVPTEIDDVMEETEEIEQPPETV
PFSRLFACADRFDWVLMVVGSVAAAAHGTALVVYLHYFAKIIQLLSHGDESSDLLFHRFK
ELALTLLYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDI
VSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIGFLNCWQIAGLTLLTGPFIVAAGGI
SNIFLHRLAENIQDAYAEAASVAEQAFSYMRTLYAFTNETLAKYSYAASLQATLRYGILI
SLVQGLGLGFTYGLAICSCALQLYVGRFLVIHKYAHGGEIVTALFAVILSGLGLNQAATN
FYSFEQGRIAAYRLFEMIARSSSSVDNEGNILDSVQGNIEFRNVYFSYLSRPEIPILSGF
YLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLV
TQEPALLSLSIRDNIAYGRDATSLQIEDAAKTAHAHTFISSLEKGYDTQVGRAGLSLTEE
QKIRLSVARAVLSNPCILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKN
ADFIAVMEEGQLMEIGTHDELIASDGLYAELLRCEEAAKLPKRMPARTPNETSTFQIEKD
STLQEPSSPKFTKSPSLQRASNLHTARSPDSNYNSHGSPKKTVENGTENQPPIKRQDSFE
KRLPNLPKIDVHSIPRQQSLNSDPESPISPLLTSDPDNERSHSQTFSRLNSRSDHHPVKV
KVKVKSVKEKKERKDPPSMWRLVELSFAEWLYAVLGSIGAAIFGAFNPLLAYVIALVVTE
YYKNDTHRHMRHEVDKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLR
NEIGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDVTAVLVALLIGMLLEWRLA
LVALATVPVLTVSAIAQKLWLAGFSKGIQEMHRKASLVLEDSVRNIYTVVSFCAGNKVME
LYRFQLHKIFTKSFLHGLTIGFAFGFSQFLLFACNAFLLYYTALSIKNHNVNLPTAIKSY
IVFSFSTFALVEPFGLAPYILKRRKSLTSVFEIIDRIPKIDPDDPTALKPPNVYGSIELK
TIDFSYPTRPDILVLNNFSLKITGGTTVAVVGVSGSGKSTIISLIERFYDPVSGSITLDG
RDLKQFNLRWLRNHLGVIQQEPAIFLTTIKENIIYARHNASEAEIKEAARIANAHHFISN
LPHGYDTHVGMRGVELTPGQKQRIAIARVVLKNAPILLLDEASSAIESESSRVVQEALDT
LVMGNKTTILIAHRAAMMRHVDNIVVINGGRIVEEGGHDSLMEKNGLYVRLMQPHFGKGV
RQHRLL
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgatggtatcaagaggtttatttggttggtcaccgccgcggcaacagccgctaacgccg
gtgtcagaggtgtcggagtgtccgtctccttacgtagacacaagtaacgatgcggttcct
acagagattgatgatgtaatggaggagacggaggagatcgagcagcctccggaaacagtg
ccgttttcgaggctgttcgcgtgtgctgataggtttgattgggtgcttatggtagttgga
tcggttgctgcggcggcgcatgggactgcgcttgtggtttacttgcattattttgctaag
atcattcagttgctgagtcatggcgatgagagttcggatttgctttttcataggttcaaa
gagcttgctctgacccttctttatattgctggtggtgtttttgctgctggttggatagag
gtttcatgttggattcttaccggagaaaggcagacagctgttattaggtctagatatgtc
caagtacttctaaatcaagacatgagtttcttcgacacatatggcaacaatggtgacatt
gtgagtcaagtattaagtgatgtattgcttatccagtctgcacttagtgaaaaagtcggt
aattatatccataacatggctacattcttcagtgggcttgcaattggattcctcaactgt
tggcaaattgctgggctgactttattaactggcccctttatagtggctgcaggaggaata
tcaaatatatttctccatagacttgcagagaatattcaagatgcttatgctgaagcagct
agtgttgctgaacaggcgttttcttacatgaggacattatacgcattcacaaacgaaaca
ctagcaaaatactcatatgcagcttcactgcaagctacattaagatatggtattctaata
agtcttgtacaagggttaggacttgggttcacatatgggcttgcaatttgctcttgtgct
ttacagctttatgttggaagatttttagttatacacaaatatgctcatgggggcgaaatt
gtcacagctctttttgctgttatcttaagtgggcttgggttgaatcaagcagctacaaat
ttttattcatttgagcaaggaaggattgcagcatatagactctttgagatgattgctcgt
tcatcatccagtgttgataatgagggaaacattcttgattctgttcaagggaatattgag
tttagaaatgtttattttagttatttgtcacgtcctgagataccgattttgagtggcttt
tatctcactgttcctgctaagaaaactgtggcacttgttggaagaaatggatctggtaaa
agtagcattattccacttatggaacggttttatgatcctacattaggtgaagttcttctg
gatggagagaacatcaagaacctgaaattggaatggctaaggagtcaaattggtttagtg
actcaagagcctgcattactaagcttaagtatcagggacaatatcgcctatgggagagat
gccacatcacttcaaattgaagatgcagctaaaacagctcatgcacatacattcatcagc
tcacttgaaaaaggatacgatacacaggtaggtagggctggtttatctttaacagaagaa
cagaagataagactttctgttgctagggcagtgctttcgaatccttgtattcttcttctt
gatgaggtgacaggtggacttgattttgaagctgaaagatctgttcaggaggctttggat
ttgttaatgttgggtcgttcaaccattataattgctagaaggctttctttaattaaaaat
gctgattttatagctgtgatggaggaaggtcagttaatggagattgggacacatgatgaa
ttaatagcttcagatgggttatatgcagagcttttaagatgtgaagaagcagctaaactc
ccaaaaaggatgcctgcaagaacccccaacgagacctcaacatttcaaatcgaaaaagat
tccaccttacaagaaccatcatctcccaaatttaccaaatcgccctcacttcagcgagcc
tccaacctacacacagcaagatctccagattccaattacaactcacacggatctccaaaa
aaaacagttgaaaatggaacagaaaaccagccaccaataaaaagacaagacagttttgag
aaaagattaccaaatttaccaaaaatcgatgtccattcaatcccacgccaacaatcactc
aattctgatcccgaatcaccaatttcaccattgttgacatctgatccggataatgaaagg
tcacattcacaaactttcagtcgacttaattctcgttctgatcaccatccggtcaaagtc
aaagtcaaagtcaaatcagtgaaggagaagaaagaacgaaaagatccgccatcaatgtgg
aggcttgtggaacttagctttgctgaatggctttatgctgttttgggaagcattggtgct
gcgattttcggtgcttttaaccctcttctcgcgtatgtaatcgccctagttgtcacagaa
tattacaaaaatgacacccacagacatatgcgacatgaagtggataaatggtgcttaatt
atcgcatgcatgggtgttgttactgtggtagcaaattttttgcagcatttctattttggg
ataatgggggagaaaatgacagagagagttaggagaatgatgttttctgcaatgcttagg
aatgaaattgggtggtttgatgaagaagagaacagtgctgatacattgtcaatgcggttg
gcaaatgatgcaacttttgtgagagctgcttttagcaaccgactttctatttttatacaa
gatgttacggctgttcttgtggcactcctgatcgggatgcttttagaatggcggttggct
ttagtggctctggctacagtacctgttcttactgtttccgctattgctcagaaactatgg
ctagccggattctcaaaaggcatccaagaaatgcacagaaaagcatcattagtccttgag
gactcagttagaaacatctacactgtagtctcgttttgcgccggaaacaaagtaatggag
ctttaccgcttccaactccacaaaatcttcacaaaaagcttcctccacggcctaacaatc
ggcttcgcctttggattctcccaattccttctcttcgcctgcaacgccttcctcctttac
tacaccgcactctcaatcaaaaaccataacgtcaatctcccaaccgctatcaaatcctac
atcgtcttttcattttccacttttgcccttgtcgagcctttcggtctcgccccttacatt
ctcaaaagacgaaaatccttgacttccgtattcgaaataatcgaccgaattcccaaaatc
gaccccgacgaccccaccgcgttaaaaccaccaaacgtctacggctccatcgagttgaaa
accatcgacttttcctacccgacgcgccccgacatcctcgtactaaacaatttttccctt
aaaataaccggcgggacaaccgtcgcggttgtcggcgtctccggatccggtaaaagcacg
atcatatcattaatcgaacggttctacgatccggtttccggaagcatcacattagacgga
cgcgatttaaaacagttcaacctccgatggttgcgaaaccacctcggtgtaatccaacaa
gaacccgcgatatttttaacaacgattaaagagaatataatctacgcgcgacataacgcg
agcgaggcggagattaaagaagccgcgaggattgctaacgcgcaccatttcataagcaac
ttgccacacgggtacgacacgcatgtggggatgcgaggggtggagttgaccccgggtcaa
aagcaacggatcgcgatagcgagggttgttttgaaaaacgcgccgattttgttgttggac
gaggcgagttcggcgattgagagtgagtcgagtcgggtggttcaagaggcgcttgatacg
ttggttatggggaataaaacgacgattttgatagcgcatagagcggctatgatgagacat
gttgataatattgttgtgattaatggtgggaggattgttgaggaaggtgggcatgattct
ttgatggagaagaatggtttgtatgtgaggttaatgcaacctcattttgggaagggtgta
cgtcaacataggcttctttag
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integrated database retrieval system
