Lactuca sativa (garden lettuce): 111898158
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Entry
111898158 CDS
T05352
Name
(RefSeq) serrate RNA effector molecule
KO
K27103
serrate RNA effector molecule
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111898158
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
111898158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
111898158
NCBI-ProteinID:
XP_023749844
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All DBs
Position
3:251193524..251200958
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AA seq
765 aa
AA seq
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MAEVMDTPVDAVERRSSRERKDEDGEGNDDGEDNNKSTGIENPDAASSPPPPLPPRRNDR
DSRERRNDERDRDTDRPPNRRSDYYEHRNRSPPGPPPRDYKRRAASPNSPPPPYRDRRGG
GHSPPPRRSPPFPPFKRSRRDDGGYDGRRGSPRGGFGPGDRRFGYDYPGGYERDMGGRPG
YPDDRPRGRYGGRSSGGYQGGPSDWDSARGGYNDHGNTHREGLMSYKQFIQELEDDVLPS
EAERRYQEYKSEYISTQKQAYFDAHKGEDWLKDKYHPTNLLAVIERRNESARKLAKEFIL
DLQNGSLDLGPGVTASSSNKTGQTSNPNSEDEQDPGGKRKRHGRKDSDPFSPKAHPISSE
PRRIQADVEQALALVKKLDLEKGIEDNILSRGDSDRSHRDRSHGGSGGGSSGPVVIVRGA
AAVKGLEGVELLDTLITYLWRIHGLDYYGMTEKSEPKGFRHVRPESKNSDAKTNGMEWEK
KLETRWGERLKGQDPLEVMTAKEKLDAVAAESLDPYVRKIRDEKYGWKYGCGAKGCTKLF
HAAEFVHKHLKLKHPELVMEVTAKVREDIYFQNYMNDEDAPGGIPIMQPSQPKDRPQRRR
PGMENRLKDDRRRDNDGRNNGGGGERFDSRGENPESMEFQANNDGGGDDDQMFDSYGGQG
LHAPFPSDIPPPPVLMPVPGAGPLGPFVPAPPEVAMRMLRDQGGPSPFEGGGGGGRNGRS
GPQMSGPAPIIALPPSFRQDPRRLRSYQDLDAPEDEVTVIDYRSL
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtgatggacacgccggtcgatgcagtggaacgtcgtagtagccgagagcgc
aaagatgaagacggagaaggcaatgacgacggcgaagacaataacaagtccaccggaatc
gagaaccccgatgctgcttcttctccaccaccgccactgcctccacgccgcaatgaccgt
gattccagagagagaagaaacgatgaaagggatcgggacactgaccgtccacctaatcgt
cgttccgattactatgaacaccgtaatcgctctcctcctgggccacctcccagggattat
aagcgtcgtgctgctagccctaactctcctccgcctccatatcgagaccgacgtggtggc
ggtcactcccctccaccccggaggtcacccccatttcctccttttaagcggtctcgtagg
gatgacggtggttacgatggtcgccgtggaagtcctcgcggaggttttggacctggtgat
agaaggtttgggtatgattaccctggtggctatgagcgtgatatgggcggcaggcctggc
tatcctgatgataggccccgtggtaggtatggtgggcgctcatctggtggataccaaggt
ggtccatctgattgggattcggctcgtgggggttacaatgatcatggcaatacacataga
gaaggattgatgtcttataagcagtttattcaggagcttgaagatgatgttctgccatca
gaagctgaacgcaggtatcaagaatacaaatcagaatatatatcaactcagaaacaggct
tattttgatgctcataaaggcgaagattggttgaaagacaaatatcaccccacaaatttg
cttgctgttattgaaaggagaaatgaatctgcacgaaagctagccaaggaatttatactc
gacttgcaaaatggatccctggatttaggacctggtgtcaccgcttcatcttcaaacaaa
accggtcaaacaagcaaccccaattccgaagacgaacaagatccaggcggcaaaagaaag
cggcatgggcggaaagattccgacccattctcaccaaaagcccacccaatcagctccgag
cccagaagaatccaagccgatgttgaacaagccctagccctcgtgaaaaaactcgatttg
gaaaaaggaatcgaagacaacatattatcaagaggcgattccgatcgatcacacagagat
agatctcacggcggctctggcggtggttccagcggtccggtggtgatcgtacgcggtgct
gccgccgtgaaaggtctcgagggtgttgaattacttgacacactcattacttatctctgg
cggattcatggtttggattattatggtatgactgagaaaagtgaacccaagggattccga
catgttcggccggaatcgaagaattccgatgcgaaaacgaacggaatggaatgggagaag
aagctggaaacacgttggggggagagattgaagggtcaggatccgctggaggtgatgact
gcaaaggaaaagcttgatgcagttgcagctgagtcgttggatccgtatgtgagaaaaatt
agggatgaaaaatacgggtggaaatacgggtgtggggctaagggttgcacgaagctattt
catgctgctgagtttgttcataaacatttgaagctgaagcatccggaacttgtcatggaa
gtgactgcaaaagttcgtgaagatatatatttccagaattatatgaatgatgaagatgca
cctggtgggatacctattatgcagccttctcaaccgaaagataggccacagaggcgtagg
ccgggaatggaaaatcgactgaaagacgaccgacggagagacaatgatggcagaaataat
ggcggtgggggtgaaagatttgatagcaggggggagaatccagagtcgatggagtttcag
gccaacaatgatggtggtggtgatgatgatcagatgtttgattcttatggtggacaaggc
ctccatgcacctttcccttccgacattcctccacctcccgtattgatgcctgtacctggt
gctggtcctttgggtccgtttgtccctgctcctcctgaagttgcaatgcggatgctgcgg
gaccaaggcggtccttccccttttgaaggcggcggtggtggcggtagaaacgggcggagt
gggccccagatgagcggtcctgcccctataattgctttgcctccgtctttcagacaagat
cctcgtcgtttacgaagctaccaagaccttgatgcgccagaggatgaggtgacagtgata
gactacaggagtctctag
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