Lactuca sativa (garden lettuce): 111898177
Help
Entry
111898177 CDS
T05352
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111898177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111898177
Spliceosome [BR:
lsv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111898177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
111898177
NCBI-ProteinID:
XP_023749863
LinkDB
All DBs
Position
1:13149681..13154813
Genome browser
AA seq
487 aa
AA seq
DB search
MANLEDSFLADLEDLSDNDNENLDEDNGDAENMEEDVNGDLADIEALNYDDLDSVSKLQK
TQRYTDIMKKVEDALEKGSDMSIQNQAMVLEDDPEYQLIVECNTLSVDIENEIVIIHNFI
RDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAIIMVVSVTASTTSG
KPLPENTLQKTIEACDRALTLDASKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAG
GLTSLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEVFQTTPPGLKMRACRLLA
AKSTLAARVDSIRGDPSGKQGRMYREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGG
RRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSKL
AAKVAKKGKDKQYSSGGATSGLTSSLAFTPVQGIDLIDPQADANRLGSGSQSTYFSETGT
FSKIKRI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccttgaagattcttttctggcagatcttgaggatctatctgacaatgataat
gagaacctggatgaagataacggggatgcagaaaacatggaagaagatgtgaatggagac
ttagctgatatagaagccctcaactatgatgacttagacagtgtctcaaagttacaaaaa
acacaacgttatacagatatcatgaaaaaagtcgaagatgcccttgaaaaggggtcagat
atgtcgatccaaaaccaagccatggttctagaagacgatccagaataccaactaatagtc
gaatgcaacacattatcagtcgacatagaaaacgaaattgtcataatccacaattttata
cgcgataaataccgattaaaatttcctgaactcgaatctctggttcatcacccgattgat
tacgcgcgtgtggtcaagaaaataggaaatgaagttgacctaaccctagttgacttagaa
ggtcttctcccctcagccatcatcatggttgtttcagtcacagcctcaaccacaagtgga
aagccacttcccgaaaataccctccaaaaaaccatcgaagcatgcgatcgtgcccttact
ttagacgcttcaaaaaagaaagttctggattttgttgagagtagaatgggctacattgca
ccgaatctttccgccattgttggaagtgcagttgctgcaaaacttatggggacagctggc
gggctgacatcactcgcaaagatgccagcttgtaatgtgcagcttttaggtgctaaaaag
aagaatcttgcagggttttctactgctacatctcagtttagagttgggtatattgagcaa
acggaggtttttcagactacacctcctggtttaaagatgcgggcttgtagacttttggct
gcaaagtcaactctagctgcacgtgttgactccatcaggggggacccgtctgggaaacaa
gggagaatgtatcgggaagagattaggaagaagattgaaaagtggcaggaaccaccgcca
gctaagcaacctaagccacttccagtacccgattctgaacccaaaaagaaaagaggtggg
aggcgattgaggaaaatgaaggagagatatgctattacagacatgcggaaactggcaaac
agaatgcaatttggagtgcctgaagagagctcattaggtgatggactaggagaaggatac
ggtatgcttggtcaagctggaaacgggaagctgcgtgtatcagttggtcaaagcaaactc
gctgctaaagttgccaaaaagggcaaagataaacaatatagtagtggtggggctacctct
ggattgacttcaagtttggctttcacacctgttcaggggattgatcttatagatccacag
gcagatgctaatagacttgggagtggatctcagagcacgtatttttcagagacaggaact
ttttcaaagatcaagaggatatga
DBGET
integrated database retrieval system
