Lactuca sativa (garden lettuce): 111898346
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Entry
111898346 CDS
T05352
Name
(RefSeq) multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111898346
Enzymes [BR:
lsv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
111898346
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111898346
Prokaryotic type
111898346
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
111898346
NCBI-ProteinID:
XP_052620204
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All DBs
Position
5:88776110..88780404
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AA seq
694 aa
AA seq
DB search
MMLHRNMGLLTLYTAFPVRCHRQLKPSCNHLLKPYCFTQSQSAAMKSPLEESDVGISCYI
SPLPGFRGILKQRYSDFIVNEVDLDGNVVHLTSLDAPMETAEEHESKTTNQPNGNHCSEI
ESFRALVGDSDANSLKEFIDKINSNDEDGVTVTNTSIVLSPSSDKVHRTAVHNFFKEKLK
FLVTDTVDGPESSSKCIRVRLNSGGNNERGRGSKKRKGRDETPYDSRGSDHWPEHLGKFL
RFHLCKENKDTQEALGVIGKMLGIQPRAFGFSGTKDKRAVTTQRVTVFKQRANKVANLNK
RLIGIKVGDFSYVNEGLLLGQLHGNRFTITLRGVVADSEDTVKAAADALGKHGFVNYFGM
QRFGSGSIPTHLIGAKLLKGEWKEAVSMILDPRDGEKDDIRRIREYYKESQDIDGTLRQL
PRFLVAEKAILQCLKKCPGNYLQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQKYGNEE
VVLGDLVYCNEESCNEIKEVKVKVNDSEYEENNDSLENNDLDEGDALPSEGTCTSVKVVN
KEDILSGNYTVSDVVLPLPGSRVIFPNNDIQQYYQDLADKDGVSLMESMHNVKEFSLTSM
TGAYRRVFGKAKDFEWELIKYRDVSIPLAMTDLDIVSKANEGDGIKNESLELELGEDQLA
LKLSFTLPASCYATMAIRELLKTSTSTAFHKSLN
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgatgctacatagaaacatgggattgcttaccctgtatactgccttccccgttcgttgt
catcggcaactaaaaccctcctgcaaccaccttctaaaaccctactgtttcactcaatca
caatcggccgccatgaaatcccccctcgaagaatccgacgtaggcatctcttgctacatc
tcccctctccctggctttcgtggcattctcaagcaaaggtactctgattttatagtcaat
gaagtggatttggatggaaatgttgttcatttgacttccttagatgcaccaatggagaca
gcagaggaacatgaatcaaagactacaaatcaaccaaatggtaaccattgtagtgaaatc
gaatcatttagagccctagttggcgactctgatgccaactccctgaaggagtttatagat
aagataaattcaaatgatgaagatggagttacagttaccaatacctccattgttctttct
ccaagttctgataaagttcatcgaacagcagttcataattttttcaaagagaaactcaag
ttcttggttacagacacagtagatggacctgaatcttcatcaaaatgcatacgtgtgaga
ttgaattcaggggggaataatgaaagaggcagaggttctaagaagaggaaaggaagagat
gagactccttatgatagtagaggttcagatcattggcctgagcatcttggaaagtttctc
agatttcatctttgtaaggaaaacaaggatacacaagaggcattaggggtgattggaaag
atgcttggcattcagccaagggcatttggattttctggtacaaaagataagcgagctgta
acaactcaaagggtcactgtatttaaacagcgtgcaaacaaagtggctaatctaaataaa
agattaattggaattaaagttggcgacttttcttatgtcaatgaaggtcttcttcttggt
caactccatggaaatcgattcacaatcacactaaggggggtggttgcagattctgaggat
actgtaaaagcagcagcagatgctttaggaaaacatggatttgtaaactactttggtatg
cagagatttgggagtggttctatacctactcacctaattggtgctaaattacttaaagga
gaatggaaagaagcagtgagcatgattcttgatccaagggatggtgaaaaagatgacata
aggaggattcgggaatattataaagaaagtcaagacattgatgggactttaagacaatta
cctcgctttcttgtggctgaaaaggccattctgcagtgtttgaaaaagtgtccagggaac
tacttgcaagctctgaaggctgttcctaggacccttagaatgatgtatgtgcacagttac
caaagctatctatggaaccatgcagctagcatgagagtacaaaaatatgggaatgaggaa
gtagtgttgggggatttggtgtattgtaatgaagaaagttgtaatgaaataaaggaagtc
aaagtcaaagtcaatgattctgaatatgaagagaataatgattcattagagaataacgat
ttagatgagggggatgcacttccatctgaaggaacttgtacctcagtaaaggtggttaac
aaggaagacattctttcagggaattatacagtttctgatgttgtccttcctttgcctggt
tcaagggtaatttttccaaataatgacattcaacaatattatcaagatttggctgataag
gatggtgtgagcttgatggagagtatgcataatgtcaaggagttttcgctaaccagcatg
acaggagcttaccggcgagtatttggaaaagccaaggattttgaatgggagttgataaag
tatagagatgtaagtatcccattggctatgaccgatttagacattgtttcaaaggccaat
gaaggtgatggtattaaaaacgagtctttggaattggaattgggagaagaccagttggcc
cttaaattgagcttcacacttccagcatcttgctatgcaactatggctattagggagttg
ctaaaaacatctacttctactgcgtttcacaagtctttaaattaa
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