Lactuca sativa (garden lettuce): 111898518
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Entry
111898518 CDS
T05352
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111898518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111898518
Membrane trafficking [BR:
lsv04131
]
Endosome - Golgi transport
Others
AP-4 complex
111898518
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
INTS1_R4
HEAT
HEAT_2
Cnd1
HEAT_EZ
PDS5
NPHI_C
PPP2R1A-like_HEAT
Motif
Other DBs
NCBI-GeneID:
111898518
NCBI-ProteinID:
XP_023750194
LinkDB
All DBs
Position
3:29172926..29177091
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AA seq
916 aa
AA seq
DB search
HSVVIAKLEQLKTIGRELAMGSQGGFGQSKEFLELVKSIGESRSKAEEDRIVLHEIETLK
RRITEPDIPKRKMKEYIIRLVYIEMLGHDASFGYIHAVKMTHDDSLLLKRTGYLAVTLFL
NEDHDLIILIVNTIQKDLKSDNFLVVCAALNAVCKLINEETIPAVLPQVVELLGHPKEAV
RKKAIMALHRFYQRSPSAVTHLVTNFRKKLCDNDPGVMGATLCPLFDLILIDVNSHKDLV
ASFVNILKQVAERRLPKSYDYHQTPAPFIQIKLLKILALLGNGDKQSSGQMYTIIGDIMR
RSDTTSNIGNAILYECICCVSSIHPSPKLFTAAADAIAKLLKSDVHNLRYMGIDALGRLI
RISPEIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVERMIEYMISINDYH
YKTEIASRCVELAEQYAPTNQWFIQTMNKVFQHAGDLVNPKVAHNLMRLIAEGFGEDDDD
DDTEDSQLRSSAVESYLRIMGEPKLASTFLQVICWVLGEYGIADGKYSASYISGKLCDVA
ETHPSDDTVKAYAVTAVMKVCSFEKAAGRKIDMLPEFQSLMESLTASHSTDLQQRAYELQ
AFINLDPDAINNIMPFDASCEEIEIDKSLSLVNGYIEKSLKDGAQPYIPEQERSGTLNIN
NFKNQDACPHSLKFVAYEVPKPVIPRMPPKVLSSAELLPEPDPFYQREVHRSPSVGSISD
TQQLRLRLDGVQKKWGQPSTTGPSTSEPESYLVNGSSEVEVSEEKQKLAGLLFGGISSRG
EKKQSQSGGQTKGSKVPRHVVDQTGQVKPAPDLLDSGSSMASSSSSMVDPFKQLEGLLLD
TSQKGPDFMCINSDTCNQNQNHDGSSDGSSNLNNRVGPLPTKGPNLKEALGKDALVRQMG
VTPTTQNPNLFKDLLR
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
cattctgttgttattgcaaagctggagcagttgaagacgatcggcagggagctcgcaatg
ggctcccagggtggcttcggccagtctaaggagtttctggagcttgttaaatcaattggc
gaatcccgatccaaagctgaagaagaccgtattgtccttcacgagatcgaaaccctaaaa
cgtcggatcaccgagcccgatatccccaaacggaagatgaaagagtacataattcgtctt
gtatacattgagatgctcggtcatgacgcctcttttgggtacattcatgccgttaagatg
acccatgacgattccctcctactcaagcgaactgggtatttggccgtcaccctgtttttg
aatgaggatcatgatttgataatattgatcgtgaacacgatccagaaggacttgaagtcg
gataatttcctggtggtatgtgctgcattgaatgcggtctgtaaattgattaatgaggag
acgataccggctgttcttccgcaggttgttgagttgttaggtcacccaaaagaggcggtg
aggaagaaggctataatggccctgcatcggttttatcaaaggtctccgtcagccgtgact
catcttgtaacgaatttccgaaagaaactttgtgataatgaccctggagtaatgggtgct
actctttgccctctatttgatcttatcttaatagatgtaaattcacataaggatcttgtt
gccagctttgtaaacatcctcaaacaagttgctgaacgcagattgcccaagagttatgat
tatcatcagacacctgcaccattcatacagattaagttgctaaaaatcctggctttactt
ggtaatggtgacaagcagtcaagtgggcagatgtatactatcattggagacataatgaga
agaagtgacacaactagcaatataggaaatgcaattctttatgaatgtatatgctgtgtc
tcatctatacatcccagccctaaattattcacagctgcagctgatgcaattgctaaactt
ttgaagagtgatgttcataatctaaggtatatggggattgatgcacttggtcgattgata
aggataagcccagaaattgctgagcaacatcaacttgctgtaattgattgcttagaggac
ccagatgatactttaaagaggaaaacctttgagctgctttataaaatgacaaagtcctcg
aatgttgaagttatagtagagcgtatgatagagtacatgataagcatcaatgattatcat
tacaaaactgaaatagcatctagatgtgttgagcttgctgaacaatacgcacctaccaac
caatggtttatccagactatgaacaaagttttccagcatgctggggatttggtgaaccct
aaggtggcacataatttgatgcgtttgatagctgagggatttggagaggatgatgatgat
gatgatactgaagatagtcagcttagatcttctgctgtggaatcttacttgcgaataatg
ggagaaccgaaacttgcatctacatttcttcaggttatatgttgggttttgggggaatat
ggaattgcagatggtaaatattcagcctcatacatcagtggaaagttatgtgatgtggca
gaaacacatccaagcgatgatactgttaaggcatatgcagtgacagcagttatgaaagta
tgttcctttgaaaaagctgctggaagaaaaatagacatgctaccggagttccagtcctta
atggaatcactaacagcatcccactcaaccgatctccaacaacgtgcatatgaacttcaa
gcatttatcaacctagaccccgatgccataaacaatataatgccattcgatgcaagttgt
gaagaaatcgagattgataaaagcctttcccttgtaaatggttacatcgaaaagtcatta
aaagatggagcacaaccttatatacccgagcaagaaagatccggaactttaaatatcaac
aactttaaaaaccaggatgcttgtccgcattctcttaaatttgttgcgtatgaggttcca
aaacctgtaattccaagaatgcccccgaaagtactttcttcagcggaacttctacccgaa
cctgacccattttatcaacgggaggtccaccgtagcccatcggttggatccatatctgac
acccaacaactccggctacggcttgatggggtgcaaaagaagtggggccaaccatcaacc
accggtccatcaacctctgaaccggagtcgtatttggttaatggtagttcggaagttgag
gtttctgaagaaaagcaaaaacttgcaggtttactgtttggtgggataagttcacggggt
gaaaagaaacaatcacaatcgggtggtcaaaccaagggttcgaaagtaccccgtcatgtg
gttgaccaaacgggtcaagtcaaaccggctcctgacttgcttgattcagggtcaagtatg
gcgagtagctcttcttcaatggtggatccgtttaaacagcttgaaggtcttcttctggat
acaagccagaaaggtcctgattttatgtgtatcaattcagatacttgtaatcagaatcag
aatcatgatggaagctctgatgggtcgagtaacttgaataacagagtgggtcccttacca
acaaagggtccgaatctgaaagaagctttgggaaaggatgcacttgttaggcaaatgggt
gtaaccccaacaacgcaaaatcctaatttatttaaagatttgcttcgctga
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