Lactuca sativa (garden lettuce): 111898613
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Entry
111898613 CDS
T05352
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111898613
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111898613
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF5123
DUF6118
NosD
Motif
Other DBs
NCBI-GeneID:
111898613
NCBI-ProteinID:
XP_023750279
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Position
2:complement(124978125..124979966)
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AA seq
393 aa
AA seq
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MGKPSFLLFFTHAFLFMVSGILARTIQDEGSILGANSTRRGLHTACEATNKIDKCWRCKP
DWATNRQLLADCALGFAKGTTGGKGGEIYEVTDPSDDDAVNPKPGTLRCGVTQNRPLWII
FKKDMTITLKHELVMTSDKTIDGRGACVQIANGAGITIMKVKNVIIHGIHIHHIKETPGG
VIKDSDTHSGPRAKSDGDGICIFGSSKIWIDHCTLDHGADGLIDVTMGGTDVTISNCIFN
DHDKVMLLGVGNELEMNMKVTVAYNKFGCGCVQRLPRCRCGFTHVVNNDYDKWQMYAIGG
TDKPTILSQGNRFVAPDDKQYKQVTRRAEATEAEWKTWNWKSEHDILLNGAFFIPSGGNI
QHPPGMLEVETKIPVETLTRCAGLLKCTPGQPC
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaccctctttccttctttttttcacccatgcctttctttttatggtgtcgggt
attttagctaggaccatacaagatgaaggctctattcttggagcaaattcaacaaggagg
ggcctacataccgcatgcgaagcaacaaacaaaatagataagtgctggaggtgcaaaccc
gattgggcaacaaaccgtcaattattagccgattgcgctctcggttttgcaaagggaacc
accggcggaaagggcggagaaatctacgaggtcactgatccttcggatgacgatgctgtg
aatccaaaaccagggacacttcggtgtggtgttacccaaaacagacctttatggatcatc
ttcaagaaagatatgacgattacactcaaacatgagcttgtaatgactagtgacaagaca
atcgatggtaggggtgcatgcgtccagatcgctaatggtgctggtatcaccataatgaag
gtcaagaacgtcatcattcatgggattcacatacaccatataaaagaaacaccaggggga
gtgattaaggattcagatacacattctgggccaagagcaaaaagcgatggcgatggtatc
tgcatctttggttcttccaagatatggattgaccattgtacactcgatcatggtgcagat
gggcttatagatgttacaatgggtggcacagacgtaaccatttccaattgcatattcaac
gatcacgacaaagtcatgttgctaggggtaggtaatgaacttgaaatgaacatgaaagtc
acggttgcatataacaagtttggttgcggatgtgtccaaagattgcctaggtgtcgatgt
ggttttacacacgtggttaacaatgactatgacaaatggcaaatgtatgctatcggtggt
acggataaacctaccattcttagccaaggcaaccgatttgtggctcctgatgacaaacaa
tacaaacaggtgacacgaagggctgaggccactgaggcagaatggaagacatggaattgg
aaatcggaacatgatattttgctaaatggagcttttttcataccatcaggtggtaatata
caacatccccctgggatgcttgaagttgagacaaagatacccgttgagacactcacccgt
tgtgcgggcttactcaaatgtacccctgggcaaccttgttaa
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