Lactuca sativa (garden lettuce): 111898781
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Entry
111898781 CDS
T05352
Name
(RefSeq) long chain acyl-CoA synthetase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00061
Fatty acid biosynthesis
lsv00071
Fatty acid degradation
lsv01100
Metabolic pathways
lsv01212
Fatty acid metabolism
lsv04146
Peroxisome
Module
lsv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
111898781
00071 Fatty acid degradation
111898781
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111898781
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lsv01004
]
111898781
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111898781
Enzymes [BR:
lsv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
111898781
Lipid biosynthesis proteins [BR:
lsv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
111898781
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of breast milk
111898781
Exosomal proteins of breast cancer cells
111898781
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
111898781
NCBI-ProteinID:
XP_023750428
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Position
6:149673799..149678942
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AA seq
660 aa
AA seq
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MASKKFIVEVEPAIEAKDGKPSMGPVYRSVFAKDGFPPPIDGLDSCWDVFRLSVEKYPNN
PMLGTREFVDGKHGKYVWLTYKQVYDKVIRVGNAIRACGVEPGGRCGIYGANCAEWVMSM
EACNAHGLYCVPLYDTLGHGAVEFIICHAEVTLAFVEAKKIPEVLKTFPKAGEYLKTIVS
FGKVTPEQKEQCEGFGVAIHSWEEFLSLGDDKQFELPLKKKSDICTIMYTSGTTGDPKGV
LISNNSIVTLIAGVHRLLGSVDASLDSNDVYLSFLPLAHIFDRVIEECFINHGASIGFWR
GDVKLLIEDIGELKPTIFCAVPRVLDRIYSGLQQKISSGGFLKSKLFSLAYAYKLRNMKG
GKKHPEASPLSDKIVFSKIKQGLGGNVRIILSGAAPLAPHVEAFLKVVTCSHVLQGYGLT
ETCAGSFVSLPNEMEMVGTVGPPVPNLDARLESVPEMNYDALSSKPQGEICIRGDVLFAG
YYKREDLTAEVLVDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLENVFGL
VSDLDSIWIYGNSFESCLVAVANPNKQAIEHYAEAHNISGDFEALCENPKIKEYVLGELT
KVGKENKLKGFEFVKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVIDNMYQKINNR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaagaagttcattgtagaggtggagccggcgattgaggcgaaagatggaaag
ccgtcgatggggcctgtctaccgtagtgtgtttgctaaagatggttttccgcctccaatc
gatggtttagattcatgttgggacgttttccgcctctcagtggaaaaataccccaataac
ccaatgcttggtacccgtgaatttgtagatggaaagcatggaaaatatgtgtggttgact
tacaaacaagtatatgacaaggtgatacgtgttggaaatgccatccgtgcatgcggtgtt
gagcctggaggaagatgtgggatctatggtgccaattgtgcagaatgggttatgagcatg
gaggcttgtaatgctcatgggttatactgtgtacctctatatgataccttaggtcatggt
gctgtagaattcatcatttgccatgctgaggttacacttgcttttgtagaagctaaaaag
atccctgaggtgctaaaaacatttccaaaagctggagagtatctaaaaacaattgtgagc
tttggcaaagttacccctgaacaaaaagaacaatgtgaaggttttggtgtagcaatacat
tcatgggaggagttcttgtcattgggtgatgataaacagtttgagctcccactgaagaag
aaaagtgacatctgtacaataatgtacactagtgggacaactggtgatccaaaaggtgtt
ctaatttcaaataacagcattgtgacacttatagctggtgttcatcgtctactagggagt
gtagatgcatcattggattcaaatgatgtttatctctcgtttctacccttggcacatata
tttgatcgggtgattgaagaatgttttatcaatcatggagcatctatagggttttggcgt
ggggatgttaaattgctgattgaggacataggggagctaaaacctactattttctgtgct
gttcctcgtgtcttggataggatttattcaggtttgcaacagaaaatttcttctgggggt
tttctcaaaagcaaattgtttagtcttgcttatgcatacaagttacgtaatatgaaggga
gggaaaaaacatccagaagcatctccattaagtgacaaaattgtcttcagcaagataaaa
caggggctaggaggtaatgtacgcattattctctctggagctgcaccactagctccacat
gtagaagctttcctaaaagtagtaacatgttctcatgtccttcaaggatacgggctaacg
gaaacctgtgctggatcattcgtgtcactaccaaacgaaatggaaatggtgggcaccgtg
ggcccacccgtacccaatttagatgcccgtttggaatctgttcctgagatgaattatgac
gccctttcaagtaaaccacaaggagagatatgtattcgaggagatgttttatttgctggc
tattataaaagagaagaccttactgcagaagtccttgttgatggctggttccatacaggt
gatattggtgagtggcaacctgatggaagcatgaaaattattgatcgcaagaaaaacata
tttaagctctcacaaggagaatatgtggctgttgaaaatcttgagaatgtatttggactt
gtttctgatcttgattcgatatggatctatgggaacagctttgagtcttgtcttgttgct
gttgcgaatccaaataagcaagcaattgaacattatgctgaagcacataacatttctggg
gattttgaagctttatgtgaaaatcccaaaattaaagaatatgtattgggagagctcact
aaagtcggaaaagaaaacaagttgaaaggttttgaatttgtgaaagcgatccatcttgac
cctgttccttttgacatggagcgtgaccttttgaccccaacattcaagaagaaaagaccc
cagttgctcaaatactatcagagtgtaattgataacatgtaccagaaaattaacaacagg
tga
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