Lactuca sativa (garden lettuce): 111898851
Help
Entry
111898851 CDS
T05352
Name
(RefSeq) agamous-like MADS-box protein AGL16 isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111898851
Transcription factors [BR:
lsv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
111898851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
DNA_primase_lrg_N
Motif
Other DBs
NCBI-GeneID:
111898851
NCBI-ProteinID:
XP_023750504
LinkDB
All DBs
Position
6:187756396..187782031
Genome browser
AA seq
291 aa
AA seq
DB search
MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDAEVGVMIFSSTGKLHEFSNT
SMKSVIDRYHKAKDEQQMTTPISEVRLQMKEEKSETKASKRRKDSETFPLKNRTTKTKAE
GPRICMLHGQGADSENLQSQFWQREAAMLKQQLQSLQENHRRMMGEELSGLSVKDLQGME
SQLEMSLRGIRMKKDQLLFEEIEELSRKGNLIHHENVELCKKVTQIREENTELYNKIYGI
RDGEAANRNVFLTNGSSMREDPHPPIHLQLSQPDQHDATDQAPLHSTNLGL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggggaggggtaagatcgtgattaggaggattgacaattcgacgagcagacaagtgacg
ttctcgaaaaggaggagcggattgctaaagaaggcgaaagaacttgcgatcttgtgtgat
gctgaagtcggtgttatgatcttctctagcacaggcaaacttcatgaattctccaacact
agcatgaagtcggtgattgatcgataccacaaagccaaagacgaacaacaaatgacaact
ccaatttcagaggtcaggctgcagatgaaggaggaaaagtcagaaacaaaagcatccaag
aggcggaaggactctgagactttcccattgaaaaatagaaccaccaagaccaaagcagaa
ggaccaagaatctgcatgcttcatgggcaaggggcagattcggaaaatctgcagtcgcag
ttctggcaaagggaggctgcaatgttaaagcaacaactgcagagtctgcaagagaatcat
aggcgaatgatgggtgaagagctttctggtttaagtgtgaaagatctacagggcatggag
agccaacttgaaatgagtctcagaggtatccgtatgaaaaaggaccaacttctttttgag
gaaatcgaagaactcagccgaaaggggaatctcatccaccatgaaaatgtcgaactttgt
aagaaagtaacccaaattcgtgaagaaaataccgaactctacaacaagatttatggaata
agagatggagaagcagcaaacagaaatgtatttttgacaaatggttcaagcatgagagag
gatccacatcccccaatccatctccagctttctcagccagatcaacacgatgcaactgat
caagcaccactccattctacaaatttgggattataa
DBGET
integrated database retrieval system
