KEGG   Lactuca sativa (garden lettuce): 111898854
Entry
111898854         CDS       T05352                                 
Name
(RefSeq) serine hydroxymethyltransferase 2, mitochondrial
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv00260  Glycine, serine and threonine metabolism
lsv00460  Cyanoamino acid metabolism
lsv00630  Glyoxylate and dicarboxylate metabolism
lsv00670  One carbon pool by folate
lsv01100  Metabolic pathways
lsv01110  Biosynthesis of secondary metabolites
lsv01200  Carbon metabolism
lsv01230  Biosynthesis of amino acids
lsv01240  Biosynthesis of cofactors
lsv04981  Folate transport and metabolism
Module
lsv_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    111898854
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    111898854
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    111898854
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    111898854
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    111898854
Enzymes [BR:lsv01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     111898854
SSDB
Motif
Pfam: SHMT Aminotran_1_2
Other DBs
NCBI-GeneID: 111898854
NCBI-ProteinID: XP_023750518
LinkDB
Position
6:187855863..187859839
AA seq 520 aa
MVMAIALRRLCSSHIKRHYLRRPSNGSSLACMSSLPNPAAHDIEVSRVNWTKQLNAPLEE
IDPEIADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEY
IDMAERLCQKRALEAFNLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGH
LSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSAVLFRPKLIVAGASAYARV
YDYARMRKVCDKQKAILLADMAHISGLVAAGVLPSPFEYADIVTTTTHKSLRGPRGAMIF
FRKGLKEINKKGQEVMYEFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQE
QVLANCKKFSQSLIEKGYDLVSGGTDNHLVLVNLRNKGIDGSRVEKVMELVHIAANKNTV
PGDVSAMVPGGIRMGTPALTSRGFLEDDFVKVAELFDASVKLALKIKAASTGTKLKDFVA
TMNGDEKFQTEIIKIRGEVEEYAKQFPTIGFEKETMKYKN
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggtcatggcaatcgcacttcgaaggctctgttcttcacacatcaagcgtcactatctc
cgtcgtccctccaatggatcttccctcgcttgcatgtcttctttgccgaatccagcagct
catgatatcgaagtatcacgtgttaattggacgaagcaattgaatgctccacttgaagaa
attgatcctgaaattgccgacattattgagctcgaaaaagctaggcaatggaagggattc
gaactcataccttcagagaatttcacctcattgtcagtaatgcaagctgttggatcagtg
atgaccaacaaatacagtgaaggttatcctggtgctagatactatggaggaaacgagtac
attgatatggctgaaagattgtgtcagaagcgtgcattagaagctttcaatttggatcct
tcaaaatggggagttaatgtgcaatcattatctggatcacctgctaactttcaagtttat
actgcacttttgaaacctcatgagagaatcatggccctagatctccctcatggtggacat
ctttcacatggttatcagactgacacaaagaagatttcagctgtctcaatattttttgag
acaatgccatacagattggatgaaagcacaggttatattgattatgatcaaatggagaaa
agtgctgtgctttttaggccaaaattaatcgtagctggtgcaagtgcctatgctcgagtt
tatgactatgcccgtatgcgaaaggtttgtgacaaacaaaaagctattttattagctgac
atggcacatatcagtggattggttgctgctggtgtcttgccatcaccttttgaatatgca
gatattgtgacaaccacaacacacaagtcactacgtgggccccgtggagcaatgatcttt
ttcaggaagggactaaaagagataaataaaaaaggccaagaagtgatgtatgagtttgaa
gataaaatcaatcaagcagtgtttccaggacttcaagggggtccacacaatcatacaatt
actggtttagctgttgcattaaaacaggctacaactccagagtacaaagcatatcaagaa
caagttcttgccaattgcaagaaattttcacagagtttgatagagaagggatatgatctt
gtatccggtggaaccgataatcatttggtcttggtaaatttaagaaacaagggtattgac
gggtcaagagttgaaaaggttatggagttggtgcatattgccgccaacaaaaacactgtt
cccggtgacgtgtcagccatggtacctggcggcattcgtatgggaactcctgctctaaca
tctagaggatttcttgaggatgattttgttaaagttgcagagttatttgatgcttctgtc
aaattggccttgaaaattaaggctgcttccacaggaacaaagttgaaggactttgttgca
actatgaacggggatgagaaatttcaaacagaaattataaagattcggggggaggtcgag
gagtatgctaaacaattcccaacaattggttttgagaaggaaacaatgaagtacaaaaat
taa

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