Lactuca sativa (garden lettuce): 111898928
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Entry
111898928 CDS
T05352
Symbol
LOC111898928
Name
(RefSeq) WD-40 repeat family protein / notchless protein
KO
K14855
ribosome assembly protein 4
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111898928 (LOC111898928)
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111898928 (LOC111898928)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
DSE1_N
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
NBCH_WD40
ASA1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NLE
Beta-prop_DCAF12
CFAP251_N
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_DCAF4
eIF2A
PD40
Beta-prop_SPT8
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_NUP159_NUP214
Tricorn_N
PAC11
WDR54
RMC1_N
TRM82_WD
Beta-prop_Vps41
MIOS_WD40
Beta-prop_WDR11_2nd
DUF6732
Motif
Other DBs
NCBI-GeneID:
111898928
NCBI-ProteinID:
XP_023750610
LinkDB
All DBs
Position
4:complement(48895832..48899059)
Genome browser
AA seq
478 aa
AA seq
DB search
MEVEVAEESRELTNNVMCQLADPEGTPLGASMYLPQSVGPKELQQMVNKLLNNEEKLPYA
FYISDQELVIQLGDYLQKKKVSVEKVVTIVYQPQAVFRIRPVNRCSSTIAGHTEAVLSVV
FSPDGQQLASGSGDTTVRLWDLNTQTPMFTCTGHKNWVLCVAWSPDGKHLVSGSKSGEIQ
IWDPRTGKASGNLLTGHKKWITGISWEPVHLRSPCRRFVTSSKDGDARIWDATLRKTVII
LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYVL
RTGAFDHTRKQYSSPEEMKEAALERYNKMKGDAPERLVSGSDDFTMFLWEPSKDKRPKTR
MTGHQQLVNHVYFSPDGLWIASASFDKSVKLWNGVTGTFVAAFRGHVGPVYQISWSADSR
LLLSGSKDSTLKVWDVREKKLKQDLPGHADEVFAVDWSPDGEKVASGGRDRVLKLWMG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaagtagcagaagaatcaagggagttgactaacaacgtcatgtgtcaatta
gctgacccggagggaacgccgctcggtgcttccatgtatcttccccaaagcgttggccct
aaggagcttcaacagatggttaacaagttgctcaacaatgaggaaaagctgccatacgcc
ttttatatatccgatcaagagcttgttatacaactaggagattatttgcagaagaaaaaa
gtttctgtggagaaggtagtcacaatagtgtatcaaccacaagcagtcttccgcattcgt
ccagttaatcgatgttcttctacaattgcgggtcatacagaggctgtactttcagttgtt
tttagccctgatggacaacagctggctagtggttcaggtgacacaactgttcgcctctgg
gacttgaatacccaaacgcctatgttcacctgtacagggcacaagaactgggttctctgt
gttgcatggtcaccagatggtaaacatttagtaagtggaagcaagtctggagaaatccaa
atctgggacccacggacaggaaaagcttctggcaatctgcttactggccacaagaaatgg
attactggtatatcctgggaaccagtacacctcagatcgccatgtcgccgctttgtcacc
tccagcaaagatggtgatgcacgaatttgggatgctacattgaggaaaactgttattatt
ctaagtggtcatactcttgcagtcacttgtgtaaaatggggtggagatggagtcatatac
acaggatctcaagattgtacaatcaaagtatgggaaacaactcaaggaaaattgattcgt
gagttgaagggtcatggacattgggtgaattcattggcattaagtactgagtatgtttta
cggactggagcttttgatcatacacgtaaacagtattcatctccagaagagatgaaagag
gcagctttagaaagatacaacaagatgaagggtgatgctcctgagaggttagtttcaggt
agtgatgatttcactatgttcctctgggaaccttctaaagacaagcgtcccaaaactcga
atgacaggtcatcaacagctggtaaaccatgtttacttttcacctgatggactatggatt
gcaagtgcttcatttgacaagtctgtcaagttatggaatggggttacagggacgtttgtt
gctgcctttcggggtcatgtgggtcccgtttatcaaataagttggtctgctgacagtaga
cttctcttgagtggtagcaaggactccaccctcaaggtttgggatgtgagggaaaagaag
ttgaaacaagatcttccaggtcatgcagatgaggtttttgctgtggattggagtccagat
ggtgagaaagttgcatcgggtggtagggatagagttttgaagttatggatgggttaa
DBGET
integrated database retrieval system
