KEGG   Lactuca sativa (garden lettuce): 111898939
Entry
111898939         CDS       T05352                                 
Symbol
LOC111898939
Name
(RefSeq) ras-related protein Rab5
  KO
K07887  Ras-related protein Rab-5A
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04144  Endocytosis
lsv04145  Phagocytosis
lsv04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111898939 (LOC111898939)
   04145 Phagocytosis
    111898939 (LOC111898939)
   04148 Efferocytosis
    111898939 (LOC111898939)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111898939 (LOC111898939)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsv04147]
    111898939 (LOC111898939)
   04031 GTP-binding proteins [BR:lsv04031]
    111898939 (LOC111898939)
Membrane trafficking [BR:lsv04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    111898939 (LOC111898939)
 Endosome - Lysosome transport
    111898939 (LOC111898939)
Exosome [BR:lsv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111898939 (LOC111898939)
  Exosomal proteins of other body fluids (saliva and urine)
   111898939 (LOC111898939)
  Exosomal proteins of colorectal cancer cells
   111898939 (LOC111898939)
  Exosomal proteins of bladder cancer cells
   111898939 (LOC111898939)
GTP-binding proteins [BR:lsv04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    111898939 (LOC111898939)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA AAA_24 AAA_16 TsaE Dynamin_N
Other DBs
NCBI-GeneID: 111898939
NCBI-ProteinID: XP_023750589
LinkDB
Position
4:complement(286715237..286717848)
AA seq 204 aa
MATTGPNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSMESFTRAKKWVQELQKQGNPNMVMAL
AGNKADLEEKRNVTAEEARVYAEENGLFFMETSAKTATNVNDIFHEIAKRLPRAQSTQNP
AGMVLVDRPTQGARVGGATATCCS
NT seq 615 nt   +upstreamnt  +downstreamnt
atggcaacgactggccccaacaatctcaatgcaaaattggttttgctaggagacatggga
gctggtaaatccagtctcgttttacggtttgtcaaaggccaatttctggaattccaggaa
tcgaccatcggtgcagcgttcttttcgcaaactttagccgtaaacgacgcgacagtgaaa
tttgagatttgggatacggcgggtcaagaaaggtatcatagtttggctcctatgtactac
agaggcgctgctgcggccattattgtctacgatatcaccagcatggaatcatttacacga
gccaaaaagtgggtgcaagaacttcagaaacaaggtaatcctaacatggttatggcactt
gctgggaataaagctgatctggaagaaaagaggaatgtgacagctgaagaggcacgtgtg
tatgctgaagagaatggtcttttcttcatggagacatctgccaaaactgccaccaatgtt
aacgatatatttcatgaaatagctaagagactgcctagggctcagtccacccagaatcca
gctgggatggttcttgttgacagaccaactcaaggtgcccgtgttggtggggccactgcc
acatgctgttcataa

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