KEGG   Lactuca sativa (garden lettuce): 111898939
Entry
111898939         CDS       T05352                                 
Name
(RefSeq) ras-related protein Rab5
  KO
K07887  Ras-related protein Rab-5A
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04144  Endocytosis
lsv04145  Phagosome
lsv04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111898939
   04145 Phagosome
    111898939
   04148 Efferocytosis
    111898939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111898939
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsv04147]
    111898939
   04031 GTP-binding proteins [BR:lsv04031]
    111898939
Membrane trafficking [BR:lsv04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    111898939
 Endosome - Lysosome transport
    111898939
Exosome [BR:lsv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111898939
  Exosomal proteins of other body fluids (saliva and urine)
   111898939
  Exosomal proteins of colorectal cancer cells
   111898939
  Exosomal proteins of bladder cancer cells
   111898939
GTP-binding proteins [BR:lsv04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    111898939
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA AAA_24 AAA_16 TsaE Dynamin_N
Other DBs
NCBI-GeneID: 111898939
NCBI-ProteinID: XP_023750589
LinkDB
Position
4:complement(286686414..286688970)
AA seq 204 aa
MATTGPNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSMESFTRAKKWVQELQKQGNPNMVMAL
AGNKADLEEKRNVTAEEARVYAEENGLFFMETSAKTATNVNDIFHEIAKRLPRAQSTQNP
AGMVLVDRPTQGARVGGATATCCS
NT seq 615 nt   +upstreamnt  +downstreamnt
atggcaacgactggccccaacaatctcaatgcaaaattggttttgctaggagacatggga
gctggtaaatccagtctcgttttacggtttgtcaaaggccaatttctggaattccaggaa
tcgaccatcggtgcagcgttcttttcgcaaactttagccgtaaacgacgcgacagtgaaa
tttgagatttgggatacggcgggtcaagaaaggtatcatagtttggctcctatgtactac
agaggcgctgctgcggccattattgtctacgatatcaccagcatggaatcatttacacga
gccaaaaagtgggtgcaagaacttcagaaacaaggtaatcctaacatggttatggcactt
gctgggaataaagctgatctggaagaaaagaggaatgtgacagctgaagaggcacgtgtg
tatgctgaagagaatggtcttttcttcatggagacatctgccaaaactgccaccaatgtt
aacgatatatttcatgaaatagctaagagactgcctagggctcagtccacccagaatcca
gctgggatggttcttgttgacagaccaactcaaggtgcccgtgttggtggggccactgcc
acatgctgttcataa

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