Lactuca sativa (garden lettuce): 111898939
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Entry
111898939 CDS
T05352
Name
(RefSeq) ras-related protein Rab5
KO
K07887
Ras-related protein Rab-5A
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04144
Endocytosis
lsv04145
Phagosome
lsv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111898939
04145 Phagosome
111898939
04148 Efferocytosis
111898939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111898939
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111898939
04031 GTP-binding proteins [BR:
lsv04031
]
111898939
Membrane trafficking [BR:
lsv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
111898939
Endosome - Lysosome transport
111898939
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111898939
Exosomal proteins of other body fluids (saliva and urine)
111898939
Exosomal proteins of colorectal cancer cells
111898939
Exosomal proteins of bladder cancer cells
111898939
GTP-binding proteins [BR:
lsv04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
111898939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
AAA_24
AAA_16
TsaE
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
111898939
NCBI-ProteinID:
XP_023750589
LinkDB
All DBs
Position
4:complement(286686414..286688970)
Genome browser
AA seq
204 aa
AA seq
DB search
MATTGPNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSMESFTRAKKWVQELQKQGNPNMVMAL
AGNKADLEEKRNVTAEEARVYAEENGLFFMETSAKTATNVNDIFHEIAKRLPRAQSTQNP
AGMVLVDRPTQGARVGGATATCCS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgactggccccaacaatctcaatgcaaaattggttttgctaggagacatggga
gctggtaaatccagtctcgttttacggtttgtcaaaggccaatttctggaattccaggaa
tcgaccatcggtgcagcgttcttttcgcaaactttagccgtaaacgacgcgacagtgaaa
tttgagatttgggatacggcgggtcaagaaaggtatcatagtttggctcctatgtactac
agaggcgctgctgcggccattattgtctacgatatcaccagcatggaatcatttacacga
gccaaaaagtgggtgcaagaacttcagaaacaaggtaatcctaacatggttatggcactt
gctgggaataaagctgatctggaagaaaagaggaatgtgacagctgaagaggcacgtgtg
tatgctgaagagaatggtcttttcttcatggagacatctgccaaaactgccaccaatgtt
aacgatatatttcatgaaatagctaagagactgcctagggctcagtccacccagaatcca
gctgggatggttcttgttgacagaccaactcaaggtgcccgtgttggtggggccactgcc
acatgctgttcataa
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integrated database retrieval system