Lactuca sativa (garden lettuce): 111899077
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Entry
111899077 CDS
T05352
Name
(RefSeq) beta-xylosidase/alpha-L-arabinofuranosidase 2
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00520
Amino sugar and nucleotide sugar metabolism
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
111899077
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
111899077
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GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
111899077
NCBI-ProteinID:
XP_023750732
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Position
9:complement(214699125..214701733)
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AA seq
705 aa
AA seq
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MTLQEKAGSLVSVADPIPRLGIPSYGWWSEALHGVSDTGPATWFNKTVIPGATSFPQVIL
TAASFNESLFYKIGQVVSTEARAMYNNGVAGLTFWSPNVNIFRDPRWGRGQETPGEDPVL
ASRFGATYVRGLQEREDGDRERLKVGACCKHFTAYDLDNWTSVDRFHFDAIVTKQDLEDT
YNAPFKSCVFDGNVASIMCSYNMMNGKPTCADKELLEDTVRGEWKLNGYISSDCDSLQFM
FEDQHWRKTPEEVTADALHAGLDLNCGMSLKNFTAKAVEKGLVKESVVDRAVTNNFVTLM
RLGFFDGNPRNQFYGKLGKKDVCTQATQELARETARQGIVLLKNSFGSLPLPRRAMTSLA
VIGPNANATKAMIGNYAGVPCKYTSPLQGLSEYVKTIYVEGCDIKCNSTSNFEEANKVAA
EADAVVLVMGTDLSIEHEALDRTEIFLPGQQNLLVSEVAHAAKGPVILVIMSGGGMDLNF
AKCDQKISSILWVGFPGQEGGGALADVIFGRFNPSGRLPMTWFPRSYVDIVPMTNNKMRP
DPASGQPGQTYRFYKGETVYPFGYGLSYSAYVYRLIKAPSIMKIPLNQAHSCRSSSTCDA
IDAGDSVCKGLQFNIDVMVTNDGKLTGSHSVLLFSSPPAVFNAPQKELVDFKKVWLAPWQ
RTVLSFRVNVCKQLSLADEEGKRKVALGRYLLQIGDIKHHITLTV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacattgcaagaaaaggcgggaagcctagtgagcgtagccgaccccatccctcgcctt
ggcataccatcttatgggtggtggtcggaggctttgcatggcgtttctgacaccggacct
gcaacttggttcaacaagactgtaatccccggagccactagtttccctcaagtcatactc
actgcagcctcattcaacgaatctttattttataaaattggacaggtggtttcaaccgaa
gctagagcaatgtacaacaacggtgtagctggcctaacattttggtcacccaatgtaaac
atcttccgggatccaagatggggaagagggcaagaaacaccaggagaggatccagtccta
gccagcagattcggtgcaacttatgttagaggcttacaagagagagaggatggtgataga
gaacgactcaaagtcggggcttgttgcaaacatttcacagcctatgatcttgataattgg
actagtgtcgatcgatttcattttgatgctatcgtaacaaagcaagatttggaggataca
tataacgccccattcaaaagctgtgttttcgatggaaatgttgcgagtattatgtgttct
tacaacatgatgaatggcaaaccgacttgcgcagataaggaacttttggaagatacggtt
cgaggtgaatggaaattaaatggatacattagttccgactgtgattcattacagttcatg
tttgaagaccaacattggagaaaaacaccagaggaagttacagccgatgcattacacgca
gggttggatctcaactgtgggatgtcactaaagaatttcacagcaaaagcagtagaaaag
gggctggtgaaagaatccgtagtggatcgggctgttaccaacaatttcgtgacacttatg
agacttgggttcttcgatggtaatccacgtaatcaattttatgggaaattaggcaagaaa
gatgtttgcacacaggctactcaagaacttgctcgtgaaactgctagacaaggaattgtg
ttgcttaaaaacagttttggatctttaccacttcctagaagagcgatgacgtcgttagca
gtaatcggacctaatgctaatgccacaaaagccatgattggtaactacgcaggggttcca
tgcaaatacacaagtcctctccaagggctatcggagtacgttaaaactatatacgtggaa
ggctgtgatataaagtgtaactcgacaagtaatttcgaggaggctaataaggtggcagct
gaagcagacgcggtggttcttgtgatgggtactgatctttctatcgagcatgaggctctt
gatcggaccgagatattccttcctggacaacaaaatcttcttgtttccgaggtagcacat
gcagctaaaggacctgtgattcttgttataatgtctggaggtggaatggatctcaatttc
gcaaagtgtgaccagaaaatctccagcattttgtgggtcgggtttccaggccaagaaggt
ggaggtgctttagctgatgtcattttcggtcgttttaacccaagtggaagactacccatg
acttggtttccacgatcttatgtagacattgttccgatgaccaacaacaagatgagacca
gacccagcttcgggccaaccaggccaaacctacaggttctataaaggggaaaccgtgtat
ccatttgggtatggattaagctattctgcatacgtttatcgactcatcaaagcacctagt
atcatgaagatccctctaaaccaagctcactcttgtcggtcatcatctacctgtgatgca
atcgacgcaggagatagtgtttgcaaaggcttacaatttaatattgatgtcatggtaaca
aacgacggaaaattgactggaagtcattcggtgttgctattctcttctcctccggctgtc
tttaatgcacctcagaaggagttagtggatttcaagaaggtgtggttggcgccatggcag
cgaactgtccttagcttcagggtgaatgtttgcaagcagttgagtttggctgatgaagaa
ggtaagaggaaggttgccttgggtcgctatcttcttcaaattggtgacatcaaacaccac
ataactctcacggtttga
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