Lactuca sativa (garden lettuce): 111899090
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Entry
111899090 CDS
T05352
Name
(RefSeq) bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00740
Riboflavin metabolism
lsv00790
Folate biosynthesis
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
lsv01240
Biosynthesis of cofactors
Module
lsv_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
111899090
00790 Folate biosynthesis
111899090
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
111899090
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
111899090
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Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
111899090
NCBI-ProteinID:
XP_023750741
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Position
9:complement(212757155..212760722)
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AA seq
523 aa
AA seq
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MASISLTASSSPLLCSNMSTNFSSINGLHSRNLMHVSEAFLGTKLCSISKSGGRSKASFL
PVDLWKTAVSVSSGIEILTADSIVTMNSFPLGADEYDLDLPTPGFSSISDAIEDIRQGKM
VMVVDDEDRENEGDLVMAASSVTPEAMAFFVKHGTGIVCVTMKGEDLERLQLPLMVKHNE
DKNRTAFTVSVDAKHGTTTGVSAHDRATTVKALASKESKPEDFNRPGHIFPLRYREGGVL
KRAGHTEASVDLAMLAGFDPVAVICEVVDDDGSMARLPKLRKFVEKENMKIISIADLIRY
RRKTDHLVEQVSAARIPTTWGSFVAYCYKSILNGMEHVAMVKGEIGDGNDILVRVHSECL
TGDIYGSARCDCGNQLALSMQQIEEAGRGVVVYLRGHEGRGIGLGHKLRAYNLQDDGRDT
VEANEDLGLPVDSREYDVAAQILKDLGVRKMKLMTNNPAKCIGLKGYGLEVTSRVPLLTL
ITEHNKRYLETKRTKMGHIYGSANNGVNLINQNDKIHSVYPTN
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcttccattagcttgactgcgtcttcctcaccattactatgttccaacatgagcaca
aacttcagctcaatcaatggtcttcactctcgaaatctcatgcatgtttcagaggcgttt
cttggtacaaagttgtgctccataagtaaatctggtggcaggtccaaagcttcattcttg
cctgtagatttgtggaaaactgctgtaagtgtgtcatctgggatcgaaatactaacagca
gattccattgtcaccatgaattctttccctcttggtgctgatgaatatgacttggatctc
cccacacctggcttctcatccatttcagatgccattgaagatattcgccaaggaaagatg
gtgatggttgtagacgatgaggacagagaaaatgagggggatctagtaatggcagcatca
agtgttacacctgaggctatggctttctttgttaagcatggaactgggattgtttgtgta
accatgaaaggagaagatcttgaaagattacaacttcctttaatggtaaaacataatgaa
gacaagaatcgcacagcattcacagtttcagtggatgcaaaacatggaacaaccacaggg
gtgtcggctcatgatagggcaacaacagtaaaagctctagcttcaaaagagtcaaagccc
gaggactttaatcgcccaggccatatatttccattaagatacagagaaggaggtgttttg
aaaagagctggtcacaccgaagcttcggttgacctagccatgttagctgggttcgaccct
gtagcagtcatatgtgaggtggtagatgatgatggctcgatggctagattaccaaaactt
aggaaatttgtcgaaaaggagaacatgaaaatcatttctattgctgatcttatcaggtat
aggaggaaaaccgatcatttagtagaacaagtttctgctgcacgtatacctactacatgg
gggtcgtttgttgcttactgttataagtcgatcttaaatgggatggaacatgtcgctatg
gtcaagggtgaaatcggggatgggaatgatatacttgtgagggtacactcggaatgcttg
actggagatatatacggatctgctagatgtgattgtgggaaccaactcgcactttcaatg
caacaaattgaagaggctgggaggggcgtagtggtatacctcagaggtcatgagggtcga
ggcatcggtttaggccacaaacttcgtgcttataaccttcaagatgatgggcgtgacact
gtggaagccaatgaggacctcggcttgcctgttgactcaagggaatatgacgttgctgca
cagattttaaaagaccttggtgttagaaagatgaagctaatgacgaacaatccggctaaa
tgcattgggctcaaaggctatggtttggaggtcacaagcagagttccccttttgactttg
attacagagcacaacaagagatatcttgagaccaagcgaaccaagatgggtcacatttac
gggtcagcgaataatggggttaacctcatcaatcaaaatgataaaatacactctgtatac
cctactaattaa
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