Lactuca sativa (garden lettuce): 111899115
Help
Entry
111899115 CDS
T05352
Name
(RefSeq) pectinesterase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Module
lsv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111899115
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
111899115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
SOGA1-2-like_CC
Motif
Other DBs
NCBI-GeneID:
111899115
NCBI-ProteinID:
XP_023750759
LinkDB
All DBs
Position
5:294833205..294835365
Genome browser
AA seq
598 aa
AA seq
DB search
MEPSASFSFKKSPRSSSSSSSLLLTTIIPVAMLILLSSFLFSTSTHHHHSSTPPPLILQP
PPSPPPHSFIKSTCDTTLYPSLCFNTISSIPINLHHDNHTKTRNVLKFYIQKTINRLAIT
RSRMAAMNLKVREKNWVQNCLELLDLSQYELQESMNHLSPPYDDPPPYAAIKNLLSAAMT
NENTCIEGFADLKLNGPSQTRFGRLFQKSLTPIMRMISNCLAITNYLETIGSIYTFKDSR
LMSKGVYRDHVPSWMTAADRRLMQTSSRIIPPTVVVARDGTGNFTTIAAAVAAAPSRGKG
RHVIQIKAGIYKENLVIPRNKANIMLVGDGMNSTIITSNKNFVDGYTTFTSATLTVVGNN
FLARDLTIMNTSGPEKHQAVALRVTSDAAFYHCQFISHQDTLYAHSLSQLYRECAIHGTI
DFIFGNAAAIFERCLILVRKPILGQKNVITAQGRLDPNQNTGISLQDCTIMAAPDFKVKE
RANFSTFLGRPWRNYSRTIVMRSYLGDIIDPQGWCPWNEYSNLETVEYIEYNNFGPGADT
RKRVRWAGYHNNSRRNLEKMGIQSFLHGADEWLKSTEYLPLCSGLYAKYCKTGTTQVQ
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggagccctccgcctccttcagcttcaagaagtcaccaagatcgtcgtcctcatcttcc
tcactccttctgacaacaataattccggtagcaatgctcatcctcctctcttctttctta
ttctctacctccacccaccaccaccattcttcaacaccaccaccactcatcctccaacct
ccgccgtcaccaccaccacattccttcatcaaaagcacctgcgacaccactctctaccct
tctctctgtttcaataccatctcctcaatccccattaatctccaccacgacaaccataca
aaaacgcgcaatgtccttaaattctatatccagaaaaccatcaatcgtctggccataaca
cgttcaagaatggccgccatgaatttgaaggttcgagaaaaaaattgggtccagaattgc
ctcgaattgcttgatttgtcgcaatacgaactccaagaatcaatgaaccacttatcccct
ccttacgatgatccaccaccgtatgccgccatcaagaacctcctcagtgccgccatgact
aacgagaacacctgcattgaaggttttgccgacttaaaactcaacggccccagccagaca
cgatttggccgcttatttcagaaatctctgacaccgatcatgcgaatgatcagcaactgc
ttagccatcaccaactacctcgagactatcggctccatctacaccttcaaagattcacgt
cttatgtccaagggcgtttaccgtgatcatgtcccgtcgtggatgaccgccgctgaccgg
agactgatgcagacatcttccagaattatcccgcccaccgtcgttgtagctagagacggc
accggaaatttcacaactatcgccgctgcagttgcagcggcccccagccgaggcaaaggt
agacacgtgattcaaatcaaagcagggatctacaaggagaatctcgtgattcctagaaat
aaggctaacatcatgctcgtcggagacggaatgaactcaaccataatcaccagcaacaaa
aacttcgtcgatggctacaccaccttcacctccgcaacactaactgttgtggggaacaac
tttctcgctagggatctaacaatcatgaacacctccggtccagagaagcatcaagcggtg
gcgctaagagtaacctccgacgctgcgttctatcactgtcaattcatctcccatcaggat
acactctacgcacactccctcagccagctctaccgagaatgtgcaatccatggcacaatc
gatttcatcttcggaaacgcagcagcaatcttcgaacgatgcctgatcctcgttcgcaaa
ccaattctaggtcaaaaaaacgtgatcacagcacaaggcagactagatccaaaccagaac
accggcatatccctccaggactgcacgataatggcagcaccggacttcaaagtgaaggaa
cgagcgaatttctcaacatttctaggtcggccatggaggaactattcgagaacgatcgtg
atgagaagctatctaggtgacattatagatccacaaggttggtgtccatggaatgaatat
agcaacctggagactgttgaatacattgagtataataactttggacctggtgcagacaca
aggaagagagtccgatgggcaggttatcataataattcaagaaggaatcttgagaagatg
gggattcagtcgtttttacatggagcagatgaatggttaaagtcgactgaatatttgccc
ctctgtagtggtctctatgcaaaatattgtaaaacagggactacacaggttcaatga
DBGET
integrated database retrieval system