Lactuca sativa (garden lettuce): 111899294
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Entry
111899294 CDS
T05352
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111899294
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111899294
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
111899294
NCBI-ProteinID:
XP_023750919
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Position
2:complement(109927335..109931766)
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AA seq
448 aa
AA seq
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MAMAVVKESVFRCSILLLIASLMVVSAAAAAGDKSDVRGVETEQFQSLNVSSMAERAKAS
EALNENAVQDPEEVVSMVEMVIKNNTERRKLGYFSCGTGNPIDDCWRCDPNWQKNRKRLA
DCGIGFGRNAIGGRDGRYYMVTDSGDDDPVNPRPGTLRHAVIQDTPLWIVFKRDMVIQLK
QELIMNSFKTIDARGVNVHIANGACITVQFVTNVIIHGLHIHDCKPTGNALVRSSPEHFG
WRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVMLLGH
SDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINS
QGNRYLAPVNPFAKEVTKRVDTAASQWHGWNWRSEGDLLLNGAYFTPSGAGASGSYARAS
SLGAKSSSMVATITSGAGVLNCRRGRQC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggcggtggttaaggaatcggtgtttcgttgttcaattctgttgcttattgcg
tcgcttatggtcgtctccgccgcagccgctgccggcgataaatcggatgttaggggtgtt
gaaacagagcagtttcagagcttgaacgtctcatcaatggcagaaagagcaaaggcgtct
gaagctttgaacgaaaatgctgttcaagatcctgaggaagtggtctccatggttgaaatg
gtaattaaaaacaacaccgaaagaagaaaactcggatacttctcatgtggaaccggaaac
ccaatcgacgattgctggcgttgcgacccaaactggcaaaaaaaccggaaacgcctcgcc
gactgcggcatcggatttggccggaatgcaatcggaggtcgcgacggccgttattacatg
gtcacagattccggcgacgacgatccagtgaacccacgacccggcaccctccgccacgcc
gtcattcaagatacccctctttggatcgtgttcaaacgcgacatggtgattcaattgaag
caagaacttattatgaacagttttaaaaccatcgatgctcgtggagtcaatgttcatatc
gcgaatggagcttgtattactgttcaatttgttactaatgttattattcatggcttacat
attcatgattgtaaacctaccggaaatgcgttggtgagaagctcgccggagcattttggg
tggcggacgatggcggatggtgacgcgatttcgatattcgggtcgagtcatatttgggtg
gatcataattcgttgtctaattgtgctgatgggcttgtggatgctgttatgggctcaact
gctatcactatttctaataattacttcactcaccacaatgaggtgatgctattggggcat
agcgactcatacacaagggataagcttatgcaagtcacaattgcgtacaatcatttcgga
gaaggtcttattcaaagaatgccaagatgcagacatggatatttccatgtggtaaacaac
gactacacccactgggaaatgtacgcaattggtggaagtgcaaaccccacaattaatagt
caaggcaaccgataccttgctcctgttaatccctttgccaaagaggtcacaaaaagagtg
gatacagctgcaagccaatggcacggatggaactggagatcagaaggcgatttgctcctt
aacggcgcttatttcactccatccggcgccggcgcctccgggagttacgctagggcttca
agtttaggtgccaagtcttcttccatggtcgccaccatcacctccggcgccggcgtctta
aactgccgtagaggccgccagtgctaa
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