Lactuca sativa (garden lettuce): 111899339
Help
Entry
111899339 CDS
T05352
Name
(RefSeq) transcription factor MYB53 isoform X2
KO
K09422
transcription factor MYB, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111899339
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
111899339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-GeneID:
111899339
NCBI-ProteinID:
XP_023750952
LinkDB
All DBs
Position
1:190190041..190192296
Genome browser
AA seq
379 aa
AA seq
DB search
MMGRSSSSDENGLKKGPWTPEEDQKLVDYIERNGHGSWRALPSLAGLNRCGKSCRLRWTN
YLRPDIKRGNFTEDEEKLIIHLHSHLGNKWSSIATHLPGRTDNEIKNYWNTHLKKKLLQM
GIDPVTHQPRTDHLDILANLPQLLAIAANNLGATNLFNPSFDMNLNALMSQSDATQIAKF
QLLQNILQVLSTNSTPTNTSSIPQNLDPFYAVQLSEYLRLNPQHLQNLQDLAMNIAPSSA
PNLHPFGTHDFISPSYPNLHLDHEQGSKVFSGQDCRTNGNITLGKEEYVDFESIPPLVPA
SPDHLSHSNGGNGQSPGGDVNTDQLGSVNILKQSDHLSSSNPTSTSTTLDPNWQEFMDDE
ASGCYWKEIIERGSSPPWS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaagatcatctagcagcgacgaaaacgggcttaagaagggtccatggactcca
gaagaagatcagaagcttgtcgactacattgaacgtaatggacatgggagttggagagcg
ctgccttcactcgcaggtctgaataggtgcggcaagagttgtcgtttgaggtggactaat
tatctccgtcctgatatcaagcgaggcaattttaccgaagacgaagagaagctcatcata
cacctccattctcatctgggaaacaagtggtcatcaatagcaacgcatcttccaggaaga
actgataacgagatcaagaattactggaacacccatctgaagaaaaaactgctccaaatg
ggaatcgatccagtcacacaccagccaagaaccgatcatctcgatatccttgcaaatctg
ccacaacttctagccattgctgccaacaacttaggtgctacaaatctcttcaatccctcc
ttcgatatgaatctgaatgccttaatgtcgcaatctgatgccacccaaatcgcgaaattt
cagttgcttcaaaacatactccaagtcttgagcaccaacagcactcctactaatacttcc
tcaataccacaaaacctcgaccctttttacgctgttcagctatcagaataccttaggtta
aaccctcaacatctgcaaaaccttcaagatttagccatgaatatagctccatcatcagct
ccaaatttacatccatttgggacccatgatttcatttcacctagttatccaaacctacac
ttggaccatgagcagggttcaaaagtatttagcggacaggattgtcgaacaaatggaaat
attactctcgggaaagaagagtatgttgattttgaatctattccaccgctagtgccagcc
tcacctgatcatctcagtcacagtaatggtggcaacgggcagagtccgggaggtgatgtg
aatactgatcaattaggaagcgttaacattctgaaacaaagtgatcatctttcctcgtct
aatccgacatctacttcaactactttagatcctaattggcaagagtttatggatgatgaa
gcgagtggttgttattggaaagagatcatcgagcgggggtcttctccaccatggtcgtaa
DBGET
integrated database retrieval system
