Lactuca sativa (garden lettuce): 111899342
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Entry
111899342 CDS
T05352
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111899342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111899342
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111899342
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111899342
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
TerY_C
FAIM1
zf-RING_UBOX
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
111899342
NCBI-ProteinID:
XP_023750957
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All DBs
Position
1:complement(189838493..189841315)
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AA seq
310 aa
AA seq
DB search
MSAMSTVISYFDDGRDNPEVIDPPQIEDAMDVTEHEHVHDTSQIALKPNVLATSSVRDLL
ECPVCLNAMYPPIHQCSNGHTLCSGCKPHVHNRCPTCRHELGNIRCLALEKVAASLELPC
KYQSYGCVGIYPYYSKLKHESQCVFRPYNCPYAGSECTVIGDIPHLVNHLKDGHKVDMHN
GSTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDDE
AKNYSYSLEVGGNGRKMTWQGVPRSIRDSHRKVRDSFDGLIIQRNMGLFFSGGERKELKL
RVTGRIWKEQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaatgtcgactgtaatatcttattttgacgatgggcgtgataatccagaagtg
attgatcctcctcaaatcgaagatgcaatggatgtgactgaacatgaacatgttcatgac
acttctcaaattgctttaaagcccaatgtacttgccactagcagtgttcgtgatttattg
gagtgtcctgtttgcttgaatgccatgtaccctcctatccatcagtgttcaaatggtcac
acgttatgttcgggatgcaaacctcatgtgcacaaccgatgtccaacatgtcgacatgaa
ctaggaaacattaggtgtttagcacttgaaaaggtggctgcatcgcttgaacttccttgt
aaatatcaaagttatgggtgtgttgggatttacccgtattatagcaaattaaaacacgaa
tcccaatgtgtttttagaccttataattgtccctatgcggggtccgaatgcacggtgatt
ggtgatattcctcatcttgtgaaccatttaaaagatggacataaagttgatatgcataat
ggaagtacttttaatcatcgatatgttaagtcgaatcctcatgaggtcgagaatgcaact
tggatgcttacggtatttagttgcttcgggcagtacttttgtctccattttgaggcgttc
cagctaggcatggcgcctgtttacatcgcgtttctgagattcatgggagatgatgacgag
gcaaagaattacagttacagcctggaagtgggagggaacgggaggaagatgacgtggcag
ggagtgccaagaagcataagagatagtcacaggaaagttcgtgatagttttgatggtttg
attattcaaagaaatatggggctttttttctcgggtggagagaggaaggagttgaagctt
agagtgacaggtaggatttggaaagagcagtaa
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