KEGG   Lactuca sativa (garden lettuce): 111899470
Entry
111899470         CDS       T05352                                 
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv00040  Pentose and glucuronate interconversions
lsv01100  Metabolic pathways
Module
lsv_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    111899470
Enzymes [BR:lsv01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     111899470
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix NosD
Other DBs
NCBI-GeneID: 111899470
NCBI-ProteinID: XP_023751090
LinkDB
Position
1:98633748..98635461
AA seq 406 aa
MHTPLAPLLLVPPADMANKRFLTAACIYLILSFFQSSCDAASYNVVRFGARSNGRTDSSQ
AFQNAWKAACAASGSSNMVYIPRGTFMTKPVVFSGPCRSRILFQNDGTIVAPPNYQDMGN
SGFWILFTKLSRLTVQGGTIDARGTQFWACRRTGSRCPAGVRSITFMWSNNVLVRGVTSL
YSQTIHVAVSRCTNIVFDRMRIVAPSRSPNTDGIIVQSSTGVTIKNSLIKTGDDCIAIGP
GSKNVWIQKIACGPGHGISIGSLGNSLNEAGVQNVTVTDSIFTKTQNGVRIKSWARDSKS
YATNVEFRNIIMRAVDNPIFIDQTYCPSNRCPRETSGVQVSNVRYSNIKGTSTTVEAVKF
ECSASNPCRGIRMRNIRITTPNRPTISTCEHVAGSSSGVIIPKSCL
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgcacacaccactcgcacctctattgctcgtacctcccgccgacatggccaataagcgt
tttctaacagctgcttgcatttacttgattttatcattctttcaatcttcttgtgacgca
gcttcctacaatgtcgttaggtttggggctagatccaatggtcgaaccgattctagccaa
gctttccaaaatgcatggaaggctgcatgcgctgcctccggttcatccaatatggtttac
atccccaggggcactttcatgactaaaccagtcgtgtttagcggaccttgcaggagcagg
atcctttttcaaaacgatggcaccattgttgcaccaccaaattatcaggacatgggcaac
tcagggttctggatattgtttactaagctttctcggttaaccgttcaagggggaaccatt
gacgccaggggtactcagttctgggcttgtcgacggaccgggagtcgttgtccagcgggt
gtaaggtcgataacgttcatgtggtcgaacaatgtgttggttaggggagtaacttcattg
tacagccaaaccattcatgttgccgtgagcagatgcaccaatatcgtcttcgatcgtatg
agaatcgtagcgccaagccgaagccccaacacagatggtatcatcgttcaatcgtcaacc
ggtgttaccatcaagaacagtctgatcaagactggtgacgattgcatagcaattggtcct
ggttccaagaacgtttggatccagaagatcgcttgtggccctggccatggtataagcata
ggaagcttgggaaacagtttaaacgaagcaggagtacagaatgtaacagtcacagacagc
atcttcaccaaaacacaaaatggagtgcgaatcaagtcatgggccagggatagcaagagc
tacgcgactaatgtagagttcaggaacatcataatgagggctgtggacaatccgatcttc
atcgatcagacttactgtccaagtaaccggtgccctcgtgagacttctggagtccaagtt
agcaacgtgcgatacagcaacataaaaggtacatctacgacagtggaagctgtgaagttc
gaatgcagtgcgagcaatccgtgcagagggatccgaatgcgtaacatacgaataacgact
ccaaatcgaccgaccatatctacctgtgaacacgtagctggttcgagttcaggggtaatc
atccctaaaagctgtctttga

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