Lactuca sativa (garden lettuce): 111899470
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Entry
111899470 CDS
T05352
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Module
lsv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111899470
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111899470
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
111899470
NCBI-ProteinID:
XP_023751090
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Position
1:98633748..98635461
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AA seq
406 aa
AA seq
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MHTPLAPLLLVPPADMANKRFLTAACIYLILSFFQSSCDAASYNVVRFGARSNGRTDSSQ
AFQNAWKAACAASGSSNMVYIPRGTFMTKPVVFSGPCRSRILFQNDGTIVAPPNYQDMGN
SGFWILFTKLSRLTVQGGTIDARGTQFWACRRTGSRCPAGVRSITFMWSNNVLVRGVTSL
YSQTIHVAVSRCTNIVFDRMRIVAPSRSPNTDGIIVQSSTGVTIKNSLIKTGDDCIAIGP
GSKNVWIQKIACGPGHGISIGSLGNSLNEAGVQNVTVTDSIFTKTQNGVRIKSWARDSKS
YATNVEFRNIIMRAVDNPIFIDQTYCPSNRCPRETSGVQVSNVRYSNIKGTSTTVEAVKF
ECSASNPCRGIRMRNIRITTPNRPTISTCEHVAGSSSGVIIPKSCL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcacacaccactcgcacctctattgctcgtacctcccgccgacatggccaataagcgt
tttctaacagctgcttgcatttacttgattttatcattctttcaatcttcttgtgacgca
gcttcctacaatgtcgttaggtttggggctagatccaatggtcgaaccgattctagccaa
gctttccaaaatgcatggaaggctgcatgcgctgcctccggttcatccaatatggtttac
atccccaggggcactttcatgactaaaccagtcgtgtttagcggaccttgcaggagcagg
atcctttttcaaaacgatggcaccattgttgcaccaccaaattatcaggacatgggcaac
tcagggttctggatattgtttactaagctttctcggttaaccgttcaagggggaaccatt
gacgccaggggtactcagttctgggcttgtcgacggaccgggagtcgttgtccagcgggt
gtaaggtcgataacgttcatgtggtcgaacaatgtgttggttaggggagtaacttcattg
tacagccaaaccattcatgttgccgtgagcagatgcaccaatatcgtcttcgatcgtatg
agaatcgtagcgccaagccgaagccccaacacagatggtatcatcgttcaatcgtcaacc
ggtgttaccatcaagaacagtctgatcaagactggtgacgattgcatagcaattggtcct
ggttccaagaacgtttggatccagaagatcgcttgtggccctggccatggtataagcata
ggaagcttgggaaacagtttaaacgaagcaggagtacagaatgtaacagtcacagacagc
atcttcaccaaaacacaaaatggagtgcgaatcaagtcatgggccagggatagcaagagc
tacgcgactaatgtagagttcaggaacatcataatgagggctgtggacaatccgatcttc
atcgatcagacttactgtccaagtaaccggtgccctcgtgagacttctggagtccaagtt
agcaacgtgcgatacagcaacataaaaggtacatctacgacagtggaagctgtgaagttc
gaatgcagtgcgagcaatccgtgcagagggatccgaatgcgtaacatacgaataacgact
ccaaatcgaccgaccatatctacctgtgaacacgtagctggttcgagttcaggggtaatc
atccctaaaagctgtctttga
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