Lactuca sativa (garden lettuce): 111899513
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Entry
111899513 CDS
T05352
Name
(RefSeq) beta-xylosidase/alpha-L-arabinofuranosidase 2
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00520
Amino sugar and nucleotide sugar metabolism
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
111899513
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
111899513
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
111899513
NCBI-ProteinID:
XP_023751113
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Position
5:complement(252073816..252077702)
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AA seq
767 aa
AA seq
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MAFKNRALSVFAILAIFMMWQNTNVLAQNTPVFACDINKNPGLRNFSFCDSSLDVQTRVD
DLVKRLTLQEKIVNLVDNAGSIDRLGIPKYEWWSEALHGVSYVGPGTHFSSVVPGATSFP
QVILTAASFNETLFKTIGKVVSTEARAMYNVGLAGLTFWSPNINILRDPRWGRAQETPGE
DPTLTSKYGAAYVQGLQETDDGDNDRLKVGACCKHYTAYDVDNWKGIDRYHFNAVVTKQD
MDDTFQPPFKSCVVDGNVASVMCSYNQVNGIPTCGDPDLLTGVIRGEWKLNGYISSDCDS
LDVMFNSQHWAKTPEEIAADALIAGLDLNCGNFLGQHTEAAVKAGLVKESEVDRAVSNNF
ATLMRLGFFDGDPSKHIYGKLGPKDVCTPANQELAREAARQGIVLLKNSIGSLPLSPTSI
KSLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLTAEVATVYQAGCADVGCASAQLDEAK
KVASAADAVVLVMGSDQSIEAESRDRIDLTLPGQQSLLISQVAEVSKGPVILVIMSGGGM
DIQFAKDDPKITSILWVGFPGEAGGAALADIIFGQYNPSGRLPMSWYPQSYTKVNMTNMN
MRPDPATGYPGRTYRFYKGDTVYTFGDGLSFSEFTHHLVEAPKLVSIPLEEGHVCRSSRC
KSIDTVDQTCKNLAFNIHLRVTNSGKMRGSHTVFLFSSPPSVHGAPQKHLLGFQKVNLAP
REQGVVRFGVDVCKDLSLVDEVGNRKVALGLHVLHVGNLKHSLNVKI
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaaaaacagagcactctctgtttttgccattcttgccatcttcatgatgtgg
caaaacaccaatgttttagcccaaaacacacccgttttcgcctgtgatatcaacaaaaac
ccgggtttaagaaacttctcgttttgtgattcatcattagatgtgcaaactagggtcgat
gatttggtaaagaggctcacattacaggaaaagattgtgaatttggttgataacgccggc
agcatcgaccgccttggtattccaaaatacgagtggtggtcggaggctctacacggcgtg
tcttacgtgggtccagggacccatttttccagtgtggtccctggagcaaccagcttccct
caagtcatccttactgctgcctcgttcaatgaaactctgttcaaaacaatcggaaaggtg
gtttcaaccgaagctagagcaatgtacaacgtcggtttagcaggattaacattttggtca
ccaaatataaacattttgcgagatccacgatggggaagagctcaagaaaccccgggtgaa
gacccgaccctaacaagtaaatatggagcggcttatgttcaaggtttacaagagactgac
gatggcgataatgatcggctcaaagtcggggcttgttgtaagcattacactgcttacgat
gttgacaattggaaaggcattgatcgttaccattttaacgctgtggttacaaaacaagat
atggatgatacatttcaacccccattcaagagttgtgttgttgatggcaatgttgcaagt
gtcatgtgttcttataatcaagtaaatggcataccaacttgtggtgatccggatctttta
accggagtcattcggggcgaatggaaattaaacgggtacataagttctgattgtgattcg
ctagacgtgatgttcaattcccaacactgggctaaaacacccgaggaaatcgcagctgac
gcgttaatagctggattggatttgaactgtggaaatttcctggggcaacacacagaagct
gcggtgaaagctgggctagtgaaagaatctgaagtcgacagagctgtttccaacaatttc
gcgactcttatgagattagggttcttcgacggtgatccgagcaagcatatctatgggaaa
ctaggcccaaaagacgtatgcacaccggcgaaccaggagttagcacgcgaagcggctaga
caaggaatcgttctcctcaagaacagtatcggatccttgccactttccccaacatccatc
aaatcactagccgtgatcggacctaacgccaatgtcacaaaaaccatgatcggaaattac
gaaggtaccccttgtaagtacacgactcctcttcagggactaacggcggaggtggcgacg
gtgtaccaggcggggtgtgcggatgtaggatgtgctagtgcacaattagatgaagccaag
aaagtagcgtctgcggcagatgctgtggttttagtgatgggtagtgatcaatcgatagag
gctgagagtcgagacagaatcgatcttacacttcctggacaacaaagtcttttgatttct
caggttgcagaggtatctaaaggtccggttattcttgttataatgtctggtggaggaatg
gatatccagtttgctaaagatgacccgaaaatcaccagcatcttatgggtcgggttccct
ggtgaagctggtggcgctgccctagcagacatcattttcgggcagtataatccaagtgga
agattacccatgtcatggtacccacaatcctacacaaaggtgaacatgaccaacatgaat
atgagaccagacccagccacaggctacccgggtcgaacctatcggttctacaaaggagac
acggtttatacatttggtgatgggctgagcttttccgagttcactcaccacttagttgaa
gcacctaagcttgtatccataccattagaggaaggacatgtgtgtagatcatctaggtgc
aagtcaatcgacacagttgaccaaacttgcaagaatttagcatttaatattcatttgagg
gtgacaaatagtgggaagatgaggggaagccacacggtgtttttgttttcttcacctcca
tctgtccatggtgcacctcagaagcatttgttggggttccagaaggtgaatttggcacca
agggaacagggtgtggttaggtttggtgtagatgtgtgcaaagatttgagtttggttgat
gaagttggaaacaggaaagttgcattggggttacatgttcttcatgtgggaaacttgaaa
cactccttaaatgtgaagatatga
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