Lactuca sativa (garden lettuce): 111899533
Help
Entry
111899533 CDS
T05352
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111899533
04121 Ubiquitin system [BR:
lsv04121
]
111899533
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111899533
Membrane trafficking [BR:
lsv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111899533
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111899533
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
CxC4
Zn_ribbon_FGT1_2
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
111899533
NCBI-ProteinID:
XP_023751144
LinkDB
All DBs
Position
5:252732715..252735461
Genome browser
AA seq
278 aa
AA seq
DB search
MSSGNNTHWCYQCQQPVRLRGRNPVCPYCSGGFVQELSEVVEPGPQDIGTGPTHSHEPSE
YGFMEPYPDPRNRIMDAFAELIRQRMSGRNPNFDVRRRSEQSHGVVPWFIFDGQAPARMS
ANDRFEFFFNGAPPGPRRSNVSNIFMGPGLQELIEQLTVNGGGGSQGPPPATRSAIDSMP
TIRISNRHLNTDSHCPVCKDKFELGSEARQMPCNHIYHSGCIEPWLVQHNSCPVCRVELP
AHGMSRGSSSGGGGGGEESGGHGRGRRSPLSFLWPFRS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggcaacaatacacattggtgttaccaatgccaacaaccagtccggcttcgg
ggtcgtaacccagtatgcccgtactgctccggtgggttcgtgcaagaactgagcgaagtg
gtcgagcccggtccacaagacatcgggaccgggcccactcactcgcacgaaccgtccgag
tacggtttcatggaaccgtacccggaccctaggaacagaatcatggatgcttttgctgaa
ttaatcagacaaagaatgtctggaagaaaccctaattttgatgttagaagaagatccgaa
cagagtcatggtgtggttccatggttcatatttgatggtcaagccccggctcggatgtcg
gctaatgaccggtttgagttcttttttaacggtgcaccgccgggcccacggcggtctaat
gttagtaatattttcatggggccggggttgcaggaactgattgaacagcttacggttaat
ggtggtgggggtagtcagggcccaccaccagcaacccggtcagcgattgattctatgcca
actattcggattagtaatagacatttgaacacggattctcattgtccggtttgtaaagat
aagtttgagttagggtcggaggctaggcaaatgccgtgtaaccatatttaccattctggt
tgtattgaaccgtggttggttcagcataattcttgcccggtttgtcgggtggagttgccg
gctcatgggatgagtaggggtagcagcagtggtggtggtggtggaggggaggagagtggc
ggacatggccgaggaaggaggagtccgttatcgtttttgtggccttttcgctcgtga
DBGET
integrated database retrieval system
