KEGG   Lactuca sativa (garden lettuce): 111899572
Entry
111899572         CDS       T05352                                 
Name
(RefSeq) protein transport protein SEC31 homolog B
  KO
K14005  protein transport protein SEC31
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111899572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111899572
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lsv02044]
    111899572
Membrane trafficking [BR:lsv04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    111899572
Secretion system [BR:lsv02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   111899572
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st WD40 Beta-prop_RIG_2nd TPR_Sec16 WDR55 Beta-prop_EIPR1 SRA1 Beta-prop_EML EIF3I TPR_GEMI5 Beta-prop_WDR90_POC16_2nd MIOS_WD40 SatD
Other DBs
NCBI-GeneID: 111899572
NCBI-ProteinID: XP_023751203
LinkDB
Position
4:49074909..49080867
AA seq 1102 aa
MDTSACIKEVNRSASVAFAPEAPLIAAGTMAGAVDMSFSSSANLEIFQLDFQSDDRKLPL
VGAIPISEPFNRLSWGKSPTSGSEEFSLGLVAGGLVDGTIGIWNPRILISSEEKEGALVQ
QLTRHKGPVRGLEFSGLSPNHLASGAEEGEICIWDISKPSEPTHFPPLKGSASAKQGEIS
YLSWNRKVQPILASTSFNGTTVVWDLRKQKPIISFSDSVRRRCSVLQWHPDFATQLIVAS
DDDSSPSLRIWDMRNTMSPLRELVGHNKGVVAMSWCPSDSSYLLTCAKDNRTICWDTGSG
EIVSELPAGTNWNFDVHWYSKIPGIISASSFDGKIGIYNIEACARYGAGENYYGQAPLKA
PKWYQRKAGVSFGFGGKLVSFHTTGSSGPSEVNVHDLVTEHNLVNTSSEFEAAMRSGDRS
TLRVLCDQKSQESESEDDRETWGFLKVMFEDDGTARTKLLHHLGFTLPVEATETVQDLTQ
DVGALSFDEHEGAKDGFMGENQALNTPTDYGEDFFNNLPSPKCDTPVSTPGRNEELVSFE
DALKEGDVGNDPSFNDAVQRALVVGDYKGAVAQCIAADKMADALVIAQVGGASLWETTRD
QYLKKNRSPYLKVVAAMVNNDLVSLVNTRPLKSWKETLALLCTFAQREEWTLLCDTLASR
LVSSGNTLAATLCYICAGNIDKTVEIWSKNVTTEHKGESYVSLLQDLMEKTVVLALATGQ
KRFSASLCKLVEKYAEILASQGLLTTAMEYLKLMGTEDLSPELVILRDRIALSSQPEKEA
NGSADYGHSQPQMGAVYGANQHTNSVVEPTRNYYQDDNSYQRESYQQPPAPLYNTQYQQP
QHPSMFVPSPAAQIPPTTGFNPAPVATQAAPKVFVPSTPPIMRNADQYQQPPTLGSQLYP
NQVNANPGYQAGPPGPVSVGPVPSPMVPTSGPKITQGVAPPVRGFMPVNNNNNNNTGLQR
SSSNQMQPPSPSHPAPPPVAPPTVQTADVSNVPVQQRPVIGTLTRLFNETSEALGGGNAV
PAKKREIDDNSKKLGALFAKLNSGDISKNAGEKLVQLCQSLDRGDFATALKIQVDLTTSD
WDECSFWLATLKRMIKIRQTAR
NT seq 3309 nt   +upstreamnt  +downstreamnt
atggatacgtcggcctgcataaaagaagtgaatagatcggcatcggtggcctttgccccc
gaagccccgttgattgccgccggaactatggcgggagctgtcgacatgtcgttcagctcg
tccgcgaatctggaaatctttcaacttgacttccaatctgacgatcgcaagcttccctta
gttggggcgatacccatttcggaaccatttaatcggttatcttggggaaaatccccgaca
tcgggctcggaggaattctcactcgggctcgttgccggtggccttgtcgacggcacaatc
ggtatctggaatccacgaatacttatcagttccgaagaaaaggaaggcgctcttgttcaa
caacttacaagacacaaagggcctgttcgtggtcttgagtttagtggtctttcaccaaac
catcttgcttctggcgcagaagaaggagaaatctgtatatgggatatttctaaaccatca
gaacctacacattttcctcctctcaagggaagtgcgtcagctaaacagggtgaaatatct
tatttatcatggaacaggaaagttcagcctatcttggcatccacttcctttaatgggaca
actgtggtgtgggaccttaggaagcaaaagccaattataagtttttcagattcagttaga
agacgatgctctgttttacagtggcatcctgattttgccactcaactgattgttgcttca
gatgatgatagttcaccttctttgaggatatgggatatgcggaacacaatgtcaccattg
agagagttggtaggccacaataaaggtgttgttgcaatgtcatggtgtccaagtgatagc
tcttatttgcttacctgtgctaaagataatcgcactatttgttgggacactggttctgga
gagattgtctctgaacttccagctggaaccaattggaattttgatgttcactggtattca
aagataccaggaatcatatcagcatcttcatttgatggcaaaattggtatttataatatt
gaggcttgtgctcgatatggtgctggtgagaattactatggacaagcacctttaaaagcc
ccaaaatggtatcaacgaaaagctggagtttcttttggttttggtggaaaacttgtttct
tttcacacaactggttcttctggaccttcagaggttaatgtccatgacttggttactgag
cacaatttagttaacacctcatctgaatttgaagctgcaatgcgtagtggagatagatct
actttacgtgttctatgtgaccaaaaatctcaagaatccgaatccgaggatgacagagaa
acatggggattcttgaaagtgatgtttgaagatgatggaacagcaagaacaaagcttcta
caccatcttggattcactttgcctgttgaagcaactgaaactgttcaagatctgacacaa
gatgtaggtgctttaagttttgatgaacatgaaggagctaaagatggatttatgggcgaa
aaccaagcattaaacactccaactgattatggggaagatttctttaacaatcttcctagt
cctaaatgtgacacacctgtctcaactcctggaaggaatgaagaattggtgagctttgaa
gatgcactaaaagaaggtgatgtgggtaatgacccatcttttaatgatgctgttcaacgt
gctttggttgttggggattacaaaggagctgttgcacagtgtatagctgcagataaaatg
gcagatgctttagttattgctcaggttggtggtgcttccctgtgggagaccacacgtgat
cagtaccttaagaagaatcgttctccatacctaaaggttgttgctgcaatggtaaataat
gatcttgttagtctagtaaacaccaggcccctgaaatcctggaaggaaacacttgctctc
ttatgcacttttgctcaaagggaggagtggactttactttgtgatacccttgcctctaga
cttgtatcttctgggaacacgttagctgcgactctttgttatatatgtgctgggaacatt
gataaaacagttgaaatttggtcaaagaatgttaccactgagcacaaaggagaatcctat
gtttcccttcttcaggatttgatggagaagactgtggttcttgctttagcaactggacag
aagagattcagtgcttctttatgtaaacttgttgaaaagtatgctgagattttagcaagt
caaggacttttgacaacagctatggagtatttgaagctaatgggcacagaagatttgtct
cctgaacttgtgatcttaagagatcggattgccctttcctctcaaccagaaaaagaggca
aatggttctgctgattatggtcactctcaaccacaaatgggagctgtatatggtgcaaac
cagcatacaaactctgtggtggaacctactagaaactattatcaggatgataattcttat
caacgtgaaagctatcaacaaccacctgctcctttatacaacacgcaatatcaacagcca
caacatccctccatgtttgttccatctcctgcagctcaaattccacctacaacggggttc
aatccagctccagttgcaactcaagctgccccgaaagtatttgttccttcaactccacct
atcatgagaaatgccgaccaataccagcaacccccgaccttggggtctcagctatatcct
aatcaggtgaatgctaaccctggttaccaagcgggaccacctggaccggtttcagttggg
cctgtcccatctccaatggtccccacaagcgggccgaaaatcacacagggtgtagcacca
ccagtcagggggttcatgcctgtaaacaacaacaataacaataacacaggattacaacga
agttcctcaaatcaaatgcaaccaccaagtccttcacaccctgctccacctcctgttgcc
cctccaaccgtccagactgctgacgtgtccaatgtcccagttcaacaaaggccagttatt
gggactttgaccagacttttcaacgagacatcggaagcattgggaggggggaatgcagtt
ccagctaagaaacgtgaaattgatgacaactcaaagaaactcggggcattgtttgctaaa
cttaacagtggtgatatttccaaaaatgctggtgaaaagcttgtgcagctttgtcagtcg
ttggatcgtggtgactttgctactgccctcaagattcaggtggatcttacaactagtgac
tgggatgagtgtagcttctggttagcaacactgaaacggatgatcaagattaggcagact
gccagataa

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