KEGG   Lactuca sativa (garden lettuce): 111899632
Entry
111899632         CDS       T05352                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03083  Polycomb repressive complex
lsv04120  Ubiquitin mediated proteolysis
lsv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111899632
   04120 Ubiquitin mediated proteolysis
    111899632
  09126 Chromosome
   03083 Polycomb repressive complex
    111899632
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111899632
   04121 Ubiquitin system [BR:lsv04121]
    111899632
   03036 Chromosome and associated proteins [BR:lsv03036]
    111899632
Membrane trafficking [BR:lsv04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    111899632
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     111899632
   Cul7 complex
     111899632
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     111899632
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     111899632
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB
Other DBs
NCBI-GeneID: 111899632
NCBI-ProteinID: XP_023751243
LinkDB
Position
4:complement(121124646..121126009)
AA seq 156 aa
MSSSSKVIVLKSSDGETFEVEEAVALESQTIKHMIEDDCADTSIPLPNVTSKILSKVIEY
CKKHVETPKTDDKAAEDDLKSFDAEFVKVDQGTLFDLILAANYLNIKSLLDLTCQTVADM
IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE
NT seq 471 nt   +upstreamnt  +downstreamnt
atgtcttcatcatctaaggttattgttttgaaaagttccgatggagaaaccttcgaggtt
gaagaagcggtggcgttggagtcacagacgattaagcatatgattgaagatgactgtgcc
gacactagtatccctcttcccaacgtcacaagcaagatcctgtcaaaggttattgagtac
tgtaagaagcatgtggagacaccgaagaccgacgataaggcagctgaggacgatctgaaa
tcgtttgatgccgagtttgttaaagtggatcaggggactctattcgatctcattttggct
gctaactatctgaacataaagagcttgttggatctgacatgccaaacagttgcagacatg
ataaagggaaagacacctgaagagatccgcaaaacattcaacatcaagaatgatttcacc
cctgaagaagaggaagaggttcgtagagagaatgcatgggcatttgagtaa

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