Lactuca sativa (garden lettuce): 111899741
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Entry
111899741 CDS
T05352
Name
(RefSeq) syntaxin-125
KO
K08486
syntaxin 1B/2/3
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111899741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111899741
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111899741
Membrane trafficking [BR:
lsv04131
]
SNARE
Syntaxin (Qa)
Stx-PM
111899741
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
111899741
Exosomal proteins of other body fluids (saliva and urine)
111899741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
DHC_N2
Spectrin_SYNE1
LarA_C
DUF6261
ATG17_like
DUF1664
STX6_10_61_N
MCPsignal
CCDC-167
Motif
Other DBs
NCBI-GeneID:
111899741
NCBI-ProteinID:
XP_023751358
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All DBs
Position
4:complement(116013069..116014075)
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AA seq
299 aa
AA seq
DB search
MNDLFSSSFKKNLDDMEAGGGSAMNDTVDLDQFFQDVENVKEDMGGVEKLYKKLQESNEE
SKTVHNAKTMKQLRAKMDSDVEQVLKRVKVIKGKLVALDKSNVENRKIPGCELGSSTDRT
RTSVVSGLGKKLKTMMDSFQALRARMNDEYKETVGRRYFTITGEQANDELIDSLISSGEG
EDFLQKAIQEQGRGQIMDTISEIQERHDAVKDIEKNLIELHQIFLDMAALVEAQGQQLND
IESNVAHASSFVHRGTEQLVESRELQKSSRKCTFIAIALILVLIIVALYPVWFPMLMAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatttgttctcaagttcttttaaaaaaaatcttgacgacatggaggccggtggt
ggcagtgccatgaacgacaccgtcgatcttgatcagtttttccaagatgtggaaaatgtg
aaagaagacatgggtggagtcgagaaattgtacaaaaagctacaagaatcaaatgaggag
agtaaaacggttcataatgcaaaaacaatgaagcaactccgggccaagatggactcggat
gtggagcaagtattaaaacgcgtgaaggtcatcaaggggaagctagtggcccttgacaaa
tcaaatgtggagaatcgaaagattcctggttgtgaactaggctcgtctacggaccgaaca
cgcacttctgttgttagtggtttgggaaaaaaacttaaaaccatgatggacagttttcag
gcattgcgggcccggatgaatgatgagtacaaggagacagtcgggagaagatactttaca
attacgggtgaacaagcaaacgatgaattaattgatagtttaatatctagtggagaaggc
gaagattttcttcaaaaagcaatccaagagcagggtaggggtcaaatcatggatacaatt
tcagaaattcaagaaaggcatgacgctgtaaaagatatagagaaaaacttgatagaactc
caccaaatatttttggatatggccgcattagtagaagcccaaggacaacaattaaacgac
atcgagagcaatgtggcccatgcgagttcatttgttcatcgtgggaccgagcaattggtg
gaatcccgagagttgcaaaagagttcaagaaaatgtactttcattgctattgcccttatc
cttgtgctaataatcgttgcactttaccccgtttggttccccatgttgatggcaggataa
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