Lactuca sativa (garden lettuce): 111899763
Help
Entry
111899763 CDS
T05352
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111899763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111899763
03041 Spliceosome [BR:
lsv03041
]
111899763
03032 DNA replication proteins [BR:
lsv03032
]
111899763
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
111899763
Spliceosome [BR:
lsv03041
]
Complex A
U1 snRNP components
Sm proteins
111899763
U2 snRNP components
111899763
Complex B
U1 snRNP components
111899763
U4/U6.U5 tri-snRNP components
111899763
Complex C
U2 snRNP components
111899763
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111899763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
111899763
NCBI-ProteinID:
XP_023751373
LinkDB
All DBs
Position
2:complement(197750743..197752231)
Genome browser
AA seq
88 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNL
GEILIRCNNVLYLRGVPEDEEIEEADRD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtaccagttaatccgaaacctttcttgaacaacttgactgggaagcctgtg
attgtgaagctcaagtggggaatggagtacaaaggttatcttgtctctgttgattcatac
atgaacttgcagttggccaactctgaagaatacattgatgggcagtttactggtaacctt
ggagagattctaatcagatgtaataatgttctgtatttacgaggtgttccagaggatgaa
gaaatagaggaagcagatcgtgattag
DBGET
integrated database retrieval system
