Lactuca sativa (garden lettuce): 111899766
Help
Entry
111899766 CDS
T05352
Name
(RefSeq) probable CoA ligase CCL5
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00592
alpha-Linolenic acid metabolism
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
Module
lsv_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
111899766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Tachylectin
Motif
Other DBs
NCBI-GeneID:
111899766
NCBI-ProteinID:
XP_023751376
LinkDB
All DBs
Position
2:197677134..197679519
Genome browser
AA seq
565 aa
AA seq
DB search
MDTLEEVSPVSRFRPSGEKNNSGFDPQTGIYHSLLQLGTNNKIPTTPYLDTATFVLSQFP
KSDQAESRVALIDLATNQRATYGQLKRSIYSLATGLHHGLGIRKGDVVFLLSPNSILYPT
ICLAVFLIGGVLTTANPLNTKSEITKQVLDSGATLAVVAPGEEHKLVSTNVPILLTSRPS
SGDELSVEELIDGCEPMELPETRSAQSDTAAILYSSGTTGVSKGVVLTHANFISVMTLLK
WSVDNMSANNDVFLCFIPMFHIYGLAFFGLGLFCSGTTTVLMKKYEFQGMLEAIHTHKVN
NIPAVPPVILSLVKHDGGGYDLSSLRRVGSGAAPLSKELVDRFRARFPWVALRPGYGLTE
SCGAATLFVSNEEAKTHLAGSGGLLPSFCAKVVDFETGVAMPPYKEGELWLKGPTVMKGY
LGNEEATAATINSDGWLRTGDLCYFDEDGCLYVVDRIKELIKHNGYQVAPAELEAVLLSH
PEILDAAVIPLEDEEAGEIPMAYVVRAAGCQLSEDQVIKFVASQVAPFKKVRKVSFINEI
PKSAAGKILRKDLVAQSKPKLKSKL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggacaccttggaggaagtatcacctgttagccgatttcggccctcaggagaaaaaaac
aacagtgggttcgatccccagacagggatctaccactcgttgttgcaacttgggaccaac
aacaagatcccgaccactccttacctcgatacagctacatttgtgttgtcacagttccca
aaatcagaccaagccgaatcacgagtagctcttatcgacttggctacaaaccagcgagcc
acctacggtcaacttaaacgatcaatctactcgttagcaaccgggttgcaccacggcctt
ggtatccgtaagggggatgtcgtctttttgttatcaccaaactcaatcctctacccaacc
atatgtctagccgtgtttttaatcggcggggtcctcaccacggctaatccgcttaacacc
aagtcagaaataaccaaacaagtgctcgactcgggtgcgacattggccgttgtggctccc
ggggaggagcataagttggtgtcaactaatgtacctatcctactgacctctcgtccctct
agcggggacgagttgtctgtagaagaacttatcgacggctgtgagccgatggagttgccc
gaaacccggtcagctcagtcggatacggcggcgatactgtattcctcagggacgaccgga
gtgagtaaaggagttgttttaacacatgcaaatttcatttcagtcatgacactcttaaaa
tggtcggtcgacaacatgtcggctaacaacgatgttttcttatgtttcataccaatgttt
catatctacggtctcgcgtttttcggtttggggttgttttgttcaggtactacaacggtt
ttaatgaaaaaatatgagtttcaaggtatgttagaagctatacacactcataaagtcaac
aacattccggcagttcctccggtgatactaagtctggtcaaacatgatggaggtgggtat
gatttatcatctttgagacgggtggggtctggagctgcaccgttgagtaaggagttggtg
gaccggtttagggctaggtttccgtgggtggctcttaggccggggtatgggctgaccgag
agctgtggggcagcgactttatttgttagtaatgaagaggcgaagactcatctggctggt
tcgggcggtttgctaccgagtttttgtgctaaggtggttgattttgaaacgggggttgct
atgccgccttataaggaaggtgaattgtggctgaagggacccacagtgatgaaaggttat
ttgggaaatgaagaggccacggctgcaactattaactcggatgggtggttgaggactgga
gatctttgttattttgatgaagatgggtgtctttatgttgttgataggataaaggagctc
attaaacataatgggtatcaggtagctccagccgaacttgaagccgtgctattgagccat
cccgaaatactggatgcagcagtcataccacttgaagatgaagaggcaggagagataccc
atggcatatgtggtgagagcagctggatgtcaactcagtgaagaccaagttattaaattt
gttgccagtcaggtggctccattcaagaaggtgaggaaagtttccttcataaacgaaata
ccaaagtctgctgcaggcaagatattgcgaaaggatttagtggcacaaagcaaaccgaaa
ctcaaatccaagctttga
DBGET
integrated database retrieval system